RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 KCNV1Q6PIU1 500 aa15.03■□□□□ -0
VMP1-217ENST00000593168 KCNK18Q7Z418 384 aa15.03■□□□□ -0
VMP1-217ENST00000593168 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.03■□□□□ -0
VMP1-217ENST00000593168 GIMAP8Q8ND71 665 aaPredicted RBP15.03■□□□□ -0
VMP1-217ENST00000593168 FAM200AQ8TCP9 573 aa15.03■□□□□ -0
VMP1-217ENST00000593168 FAM161BQ96MY7 647 aa15.03■□□□□ -0
VMP1-217ENST00000593168 TRIM9Q9C026 710 aa15.03■□□□□ -0
VMP1-217ENST00000593168 NAT10Q9H0A0 1025 aaKnown RBP15.03■□□□□ -0
VMP1-217ENST00000593168 DNAJC25Q9H1X3 360 aa15.03■□□□□ -0
VMP1-217ENST00000593168 BLZF1Q9H2G9 400 aa15.03■□□□□ -0
VMP1-217ENST00000593168 RMND1Q9NWS8 449 aa15.03■□□□□ -0
VMP1-217ENST00000593168 TCEAL9Q9UHQ7 104 aa15.03■□□□□ -0
VMP1-217ENST00000593168 DNM3Q9UQ16 869 aa15.03■□□□□ -0
VMP1-217ENST00000593168 KIAA1217Q5T5P2 1943 aa15.03■□□□□ -0
VMP1-217ENST00000593168 DDX39AO00148 427 aaKnown RBP15.02■□□□□ -0
VMP1-217ENST00000593168 BIN1O00499 593 aa15.02■□□□□ -0
VMP1-217ENST00000593168 COBLO75128 1261 aa15.02■□□□□ -0
VMP1-217ENST00000593168 RPN1P04843 607 aaKnown RBP15.02■□□□□ -0
VMP1-217ENST00000593168 P4HBP07237 508 aaKnown RBP15.02■□□□□ -0
VMP1-217ENST00000593168 CASP1P29466 404 aa15.02■□□□□ -0
VMP1-217ENST00000593168 ZNF165P49910 485 aa15.02■□□□□ -0
VMP1-217ENST00000593168 MAP2K5Q13163 448 aa15.02■□□□□ -0
VMP1-217ENST00000593168 DPCR1Q3MIW9 517 aa15.02■□□□□ -0
VMP1-217ENST00000593168 CT47A1Q5JQC4 288 aaPredicted RBP15.02■□□□□ -0
VMP1-217ENST00000593168 FAM109BQ6ICB4 259 aaPredicted RBP15.02■□□□□ -0
VMP1-217ENST00000593168 SEPT14Q6ZU15 432 aa15.02■□□□□ -0
VMP1-217ENST00000593168 SMAP1Q8IYB5 467 aaPredicted RBP15.02■□□□□ -0
VMP1-217ENST00000593168 MLKLQ8NB16 471 aa15.02■□□□□ -0
VMP1-217ENST00000593168 DYDC2Q96IM9 177 aa15.02■□□□□ -0
VMP1-217ENST00000593168 BPIFA3Q9BQP9 254 aa15.02■□□□□ -0
VMP1-217ENST00000593168 SENP6Q9GZR1 1112 aaPredicted RBP15.02■□□□□ -0
VMP1-217ENST00000593168 BMP2KQ9NSY1 1161 aaPredicted RBP15.02■□□□□ -0
VMP1-217ENST00000593168 RGL1Q9NZL6 768 aa15.02■□□□□ -0
VMP1-217ENST00000593168 EYSQ5T1H1 3165 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 PVALEFA0A1B0GWK0 134 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 WDR64B1ANS9 1081 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 E9PMD0 336 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 LYPLA2O95372 231 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 EYA4O95677 639 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 CCNE2O96020 404 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 PLA2G4BP0C869 781 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 BMP6P22004 513 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 CYP4A11Q02928 519 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 CTTNQ14247 550 aaKnown RBP15.01□□□□□ -0.01
VMP1-217ENST00000593168 NEDD9Q14511 834 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 POTEGQ6S5H5 508 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 MAMDC4Q6UXC1 1216 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 DPP9Q86TI2 863 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 TPH2Q8IWU9 490 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 SYT2Q8N9I0 419 aaPredicted RBP15.01□□□□□ -0.01
VMP1-217ENST00000593168 RNF214Q8ND24 703 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 CCDC47Q96A33 483 aaKnown RBP15.01□□□□□ -0.01
VMP1-217ENST00000593168 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 GTPBP4Q9BZE4 634 aaKnown RBP15.01□□□□□ -0.01
VMP1-217ENST00000593168 ZSWIM4Q9H7M6 989 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 CBX8Q9HC52 389 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 JPH1Q9HDC5 661 aaPredicted RBP15.01□□□□□ -0.01
VMP1-217ENST00000593168 SLC5A4Q9NY91 659 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 DACH1Q9UI36 760 aa15.01□□□□□ -0.01
VMP1-217ENST00000593168 SPTBN5Q9NRC6 3674 aaKnown RBP15.01□□□□□ -0.01
VMP1-217ENST00000593168 A0A087WWV3 80 aa15□□□□□ -0.01
VMP1-217ENST00000593168 MYMKA6NI61 221 aa15□□□□□ -0.01
VMP1-217ENST00000593168 KLRC4O43908 158 aa15□□□□□ -0.01
VMP1-217ENST00000593168 XRCC6P12956 609 aaKnown RBP eCLIP15□□□□□ -0.01
VMP1-217ENST00000593168 QARSP47897 775 aaKnown RBP15□□□□□ -0.01
VMP1-217ENST00000593168 ATN1P54259 1190 aaPredicted RBP15□□□□□ -0.01
VMP1-217ENST00000593168 SLC12A3P55017 1021 aa15□□□□□ -0.01
VMP1-217ENST00000593168 DHX8Q14562 1220 aaKnown RBP15□□□□□ -0.01
VMP1-217ENST00000593168 ISM2Q6H9L7 571 aa15□□□□□ -0.01
VMP1-217ENST00000593168 C11orf57Q6ZUT1 292 aaPredicted RBP15□□□□□ -0.01
VMP1-217ENST00000593168 ARMCX2Q7L311 632 aa15□□□□□ -0.01
VMP1-217ENST00000593168 MSL3Q8N5Y2 521 aaKnown RBP15□□□□□ -0.01
VMP1-217ENST00000593168 SLC9A2Q9UBY0 812 aa15□□□□□ -0.01
VMP1-217ENST00000593168 DDX41Q9UJV9 622 aaKnown RBP15□□□□□ -0.01
VMP1-217ENST00000593168 PCDHA10Q9Y5I2 948 aa15□□□□□ -0.01
VMP1-217ENST00000593168 ZNF236Q9UL36 1845 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 DKC1O60832 514 aaKnown RBP eCLIP14.99□□□□□ -0.01
VMP1-217ENST00000593168 RHOBTB3O94955 611 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 HOXC6P09630 235 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 CYP11B2P19099 503 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 PSMC6P62333 389 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 SP2Q02086 613 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 IQCB1Q15051 598 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 KMT5BQ4FZB7 885 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 ZNF658Q5TYW1 1059 aaPredicted RBP14.99□□□□□ -0.01
VMP1-217ENST00000593168 MFSD14CQ5VZR4 134 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 UNC13DQ70J99 1090 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 C4orf19Q8IY42 314 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 TRPV1Q8NER1 839 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 NPLOC4Q8TAT6 608 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 LBHD1Q9BQE6 289 aaPredicted RBP14.99□□□□□ -0.01
VMP1-217ENST00000593168 LXNQ9BS40 222 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 VTA1Q9NP79 307 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 DDX20Q9UHI6 824 aaKnown RBP14.99□□□□□ -0.01
VMP1-217ENST00000593168 SAMM50Q9Y512 469 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 LRRC37A2A6NM11 1700 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 PLXNA1Q9UIW2 1896 aa14.99□□□□□ -0.01
VMP1-217ENST00000593168 VCANP13611 3396 aa14.98□□□□□ -0.01
VMP1-217ENST00000593168 RBM47A0AV96 593 aaKnown RBP14.98□□□□□ -0.01
VMP1-217ENST00000593168 ATG7O95352 703 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms