RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 KCTD1Q719H9 257 aa11.22□□□□□ -0.61
TUBD1-215ENST00000593110 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
TUBD1-215ENST00000593110 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
TUBD1-215ENST00000593110 EDAQ92838 391 aa11.22□□□□□ -0.61
TUBD1-215ENST00000593110 OSBP2Q969R2 916 aa11.22□□□□□ -0.61
TUBD1-215ENST00000593110 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
TUBD1-215ENST00000593110 GTF2IRD1Q9UHL9 959 aa11.22□□□□□ -0.61
TUBD1-215ENST00000593110 INSL6Q9Y581 213 aa11.22□□□□□ -0.61
TUBD1-215ENST00000593110 BACH1O14867 736 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 MBTPS2O43462 519 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 TBX10O75333 385 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 LGR5O75473 907 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 FOXK2Q01167 660 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 POU4F2Q12837 409 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 PTPROQ16827 1216 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 BRDTQ58F21 947 aaPredicted RBP11.21□□□□□ -0.61
TUBD1-215ENST00000593110 CCDC62Q6P9F0 684 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 SIRT2Q8IXJ6 389 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 TPCN2Q8NHX9 752 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 SCFD2Q8WU76 684 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 CLEC4DQ8WXI8 215 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 UPF3BQ9BZI7 483 aaKnown RBP11.21□□□□□ -0.61
TUBD1-215ENST00000593110 CLDND1Q9NY35 253 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 ADD3Q9UEY8 706 aaKnown RBP11.21□□□□□ -0.61
TUBD1-215ENST00000593110 CTNNA3Q9UI47 895 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 FAM50BQ9Y247 325 aa11.21□□□□□ -0.61
TUBD1-215ENST00000593110 SPATA31C2B4DYI2 1134 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 NOVP48745 357 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 HYAL1Q12794 435 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 IKQ13123 557 aaPredicted RBP11.2□□□□□ -0.62
TUBD1-215ENST00000593110 IKBKEQ14164 716 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 RCSD1Q6JBY9 416 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 BTNL9Q6UXG8 535 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 TAS1R3Q7RTX0 852 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 FBXO11Q86XK2 927 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
TUBD1-215ENST00000593110 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 SAMD11Q96NU1 681 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 FAM86C1Q9NVL1 165 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 KIAA1024Q9UPX6 916 aa11.2□□□□□ -0.62
TUBD1-215ENST00000593110 DNAH14Q0VDD8 3507 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 KIAA1217Q5T5P2 1943 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 SLC35F4A4IF30 521 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 TMEM221A6NGB7 291 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 M0R296 226 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 HAS3O00219 553 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 GPAA1O43292 621 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 WFS1O76024 890 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 TXNP10599 105 aaKnown RBP11.19□□□□□ -0.62
TUBD1-215ENST00000593110 RFX1P22670 979 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 SMTNP53814 917 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 PTK7Q13308 1070 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 SMAD4Q13485 552 aaKnown RBP11.19□□□□□ -0.62
TUBD1-215ENST00000593110 GPM6BQ13491 265 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 CLUL1Q15846 466 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 TMEM192Q8IY95 271 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 MYOCDQ8IZQ8 938 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
TUBD1-215ENST00000593110 POP1Q99575 1024 aaKnown RBP11.19□□□□□ -0.62
TUBD1-215ENST00000593110 PRRX2Q99811 253 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 CHMP4BQ9H444 224 aaKnown RBP11.19□□□□□ -0.62
TUBD1-215ENST00000593110 IL17RBQ9NRM6 502 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 ZNF358Q9NW07 568 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 HDAC6Q9UBN7 1215 aa11.19□□□□□ -0.62
TUBD1-215ENST00000593110 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
TUBD1-215ENST00000593110 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
TUBD1-215ENST00000593110 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 C5orf67F2Z3F1 127 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 H3BM21 787 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 M0R2C6 588 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 NMT2O60551 498 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 F2P00734 622 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 TSPY3P0CV98 308 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 TSPY8P0CW00 308 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 VCPP55072 806 aaKnown RBP11.18□□□□□ -0.62
TUBD1-215ENST00000593110 RPS6P62753 249 aaKnown RBP11.18□□□□□ -0.62
TUBD1-215ENST00000593110 TFAP4Q01664 338 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 NFX1Q12986 1120 aaKnown RBP11.18□□□□□ -0.62
TUBD1-215ENST00000593110 PLEKHG4Q58EX7 1191 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 TTBK2Q6IQ55 1244 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 ZSCAN25Q6NSZ9 544 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 DBF4BQ8NFT6 615 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 DNERQ8NFT8 737 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 PANK1Q8TE04 598 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 APPBP2Q92624 585 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 RC3H2Q9HBD1 1191 aaKnown RBP11.18□□□□□ -0.62
TUBD1-215ENST00000593110 ZNF287Q9HBT7 754 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 DMXL1Q9Y485 3027 aa11.18□□□□□ -0.62
TUBD1-215ENST00000593110 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.17□□□□□ -0.62
TUBD1-215ENST00000593110 LOC730098B7Z3J9 87 aa11.17□□□□□ -0.62
TUBD1-215ENST00000593110 FOXP2O15409 715 aa11.17□□□□□ -0.62
TUBD1-215ENST00000593110 LINC01565O15544 149 aa11.17□□□□□ -0.62
TUBD1-215ENST00000593110 AMHP03971 560 aa11.17□□□□□ -0.62
TUBD1-215ENST00000593110 HOXD8P13378 290 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms