RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CUTAO60888 179 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 ATP9AO75110 1047 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 ADAMTS4O75173 837 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 C6orf222P0C671 652 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-219ENST00000592927 ALADP13716 330 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 KCNA2P16389 499 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 PTGS1P23219 599 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 CYP2C18P33260 490 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 MCM7P33993 719 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 CDK7P50613 346 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 GJA9P57773 515 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 FOXK2Q01167 660 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 ARHGAP1Q07960 439 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 ZNF174Q15697 407 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 BRDTQ58F21 947 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-219ENST00000592927 CYFIP1Q7L576 1253 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 UPF3AQ9H1J1 476 aaKnown RBP13.38□□□□□ -0.27
DDX39A-219ENST00000592927 PCDHA7Q9UN72 937 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 PCDHB6Q9Y5E3 794 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 MYH7BA7E2Y1 1941 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 MROH7Q68CQ1 1323 aa13.38□□□□□ -0.27
DDX39A-219ENST00000592927 EPOPA6NHQ4 379 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 LAD1O00515 517 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 WNT7AO00755 349 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 NEMFO60524 1076 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 CPT1AP50416 773 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 ITGB3BPQ13352 177 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-219ENST00000592927 KCNA10Q16322 511 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 FSCN1Q16658 493 aaKnown RBP13.37□□□□□ -0.27
DDX39A-219ENST00000592927 GNASQ5JWF2 1037 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 METTL7BQ6UX53 244 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-219ENST00000592927 FAM20AQ96MK3 541 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 SPATA33Q96N06 139 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 JPH1Q9HDC5 661 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-219ENST00000592927 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 SRPRBQ9Y5M8 271 aaKnown RBP13.37□□□□□ -0.27
DDX39A-219ENST00000592927 SLC4A7Q9Y6M7 1214 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 NFASCO94856 1347 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 MYO9BQ13459 2157 aa13.37□□□□□ -0.27
DDX39A-219ENST00000592927 MOXD2PA6NHM9 499 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 NOP56O00567 594 aaKnown RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 TBX3O15119 743 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 ZEB2O60315 1214 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 CMA1P23946 247 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 SSTR3P32745 418 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 NKX3-2P78367 333 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 SP4Q02446 784 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 CALCRLQ16602 461 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 LRCH2Q5VUJ6 765 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 ARL6IP4Q66PJ3 421 aaKnown RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 POTEDQ86YR6 584 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 FAM178BQ8IXR5 827 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 SLFN12Q8IYM2 578 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 AFG1LQ8WV93 481 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 MRPS27Q92552 414 aaKnown RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 VTI1AQ96AJ9 217 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 RIT2Q99578 217 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 BCAS3Q9H6U6 928 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 DDX19AQ9NUU7 478 aaKnown RBP13.36□□□□□ -0.27
DDX39A-219ENST00000592927 SLC9A2Q9UBY0 812 aa13.36□□□□□ -0.27
DDX39A-219ENST00000592927 MYADML2A6NDP7 307 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 A6NJR5 290 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 DDX39AO00148 427 aaKnown RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 GAS7O60861 476 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 MARCKSP29966 332 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 BEX3Q00994 111 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 DGKDQ16760 1214 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 AXDND1Q5T1B0 1012 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 CCDC183Q5T5S1 534 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 CAVIN1Q6NZI2 390 aaKnown RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 PCSK9Q8NBP7 692 aaKnown RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 KLHDC9Q8NEP7 349 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 TEKT3Q9BXF9 490 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 FBXO2Q9UK22 296 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-219ENST00000592927 WDFY4Q6ZS81 3184 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 KIAA1217Q5T5P2 1943 aa13.35□□□□□ -0.27
DDX39A-219ENST00000592927 FAM237AA0A1B0GTK4 181 aa13.34□□□□□ -0.27
DDX39A-219ENST00000592927 ZBBXA8MT70 800 aa13.34□□□□□ -0.27
DDX39A-219ENST00000592927 ARVCFO00192 962 aa13.34□□□□□ -0.27
DDX39A-219ENST00000592927 CTAGE5O15320 804 aa13.34□□□□□ -0.27
DDX39A-219ENST00000592927 TLR3O15455 904 aaKnown RBP13.34□□□□□ -0.27
DDX39A-219ENST00000592927 DHX15O43143 795 aaKnown RBP13.34□□□□□ -0.27
DDX39A-219ENST00000592927 KPNA6O60684 536 aa13.34□□□□□ -0.27
DDX39A-219ENST00000592927 PPFIA4O75335 1185 aa13.34□□□□□ -0.27
DDX39A-219ENST00000592927 CA3P07451 260 aa13.34□□□□□ -0.27
DDX39A-219ENST00000592927 MMP3P08254 477 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms