RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 IMPACTQ9P2X3 320 aa13.39□□□□□ -0.27
CCBE1-203ENST00000589116 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
CCBE1-203ENST00000589116 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
CCBE1-203ENST00000589116 COL4A3BPQ9Y5P4 624 aa13.39□□□□□ -0.27
CCBE1-203ENST00000589116 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 TGFB3P10600 412 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 GUCY2CP25092 1073 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 PKN2Q16513 984 aaKnown RBP13.38□□□□□ -0.27
CCBE1-203ENST00000589116 FAM110CQ1W6H9 321 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
CCBE1-203ENST00000589116 KCNV1Q6PIU1 500 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 MYOCDQ8IZQ8 938 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 MORC4Q8TE76 937 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 CCDC102AQ96A19 550 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 FGD4Q96M96 766 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 RUSC1Q9BVN2 902 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 SEL1LQ9UBV2 794 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 PCDHA2Q9Y5H9 948 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 DOCK5Q9H7D0 1870 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
CCBE1-203ENST00000589116 NPHP3-ACAD11A0A0J9YXS1 232 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 TRIM49BA6NDI0 452 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 STRNO43815 780 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 PSAPP07602 524 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ZNF157P51786 506 aaPredicted RBP13.37□□□□□ -0.27
CCBE1-203ENST00000589116 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ZSCAN30Q86W11 494 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 FAM114A1Q8IWE2 563 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ATP6V0A1Q93050 837 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 HPS3Q969F9 1004 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 TIPINQ9BVW5 301 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 PORCNQ9H237 461 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 OLFML3Q9NRN5 406 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ANKEF1Q9NU02 776 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 LIMA1Q9UHB6 759 aaKnown RBP13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ZNF236Q9UL36 1845 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 A0A1B0GTH6 734 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ASB14A6NK59 587 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 FGFR1OPO95684 399 aaKnown RBP13.37□□□□□ -0.27
CCBE1-203ENST00000589116 PGK2P07205 417 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
CCBE1-203ENST00000589116 RARRES1P49788 294 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ZNF131P52739 623 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
CCBE1-203ENST00000589116 NEDD9Q14511 834 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 FILIP1LQ4L180 1135 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
CCBE1-203ENST00000589116 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 TSG101Q99816 390 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 PTPN18Q99952 460 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 R3HDMLQ9H3Y0 253 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 ZKSCAN5Q9Y2L8 839 aa13.37□□□□□ -0.27
CCBE1-203ENST00000589116 FAM155AB1AL88 458 aaPredicted RBP13.36□□□□□ -0.27
CCBE1-203ENST00000589116 FAM13AO94988 1023 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
CCBE1-203ENST00000589116 GSDMDP57764 484 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 ACTR2P61160 394 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
CCBE1-203ENST00000589116 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 TCP11X2Q5H9J9 407 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 ANKRD40Q6AI12 368 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 SEPT14Q6ZU15 432 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 SFR1Q86XK3 245 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 VSTM4Q8IW00 320 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 CCDC43Q96MW1 224 aaKnown RBP13.36□□□□□ -0.27
CCBE1-203ENST00000589116 NAP1L5Q96NT1 182 aaPredicted RBP13.36□□□□□ -0.27
CCBE1-203ENST00000589116 DUSP9Q99956 384 aaKnown RBP13.36□□□□□ -0.27
CCBE1-203ENST00000589116 ZHX3Q9H4I2 956 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 PARVGQ9HBI0 331 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 IVNS1ABPQ9Y6Y0 642 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 MYH11P35749 1972 aa13.36□□□□□ -0.27
CCBE1-203ENST00000589116 ARID2Q68CP9 1835 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 IGSF9BQ9UPX0 1349 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 ESPNB1AK53 854 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 KCNJ18B7U540 433 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 DLL1O00548 723 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 ZBTB39O15060 712 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 ATG7O95352 703 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 SLC10A3P09131 477 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 SUPT20HL2P0C7V6 817 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
CCBE1-203ENST00000589116 INHBEP58166 350 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 KCNJ12Q14500 433 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 UGCGQ16739 394 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 BMT2Q1RMZ1 405 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 PADI6Q6TGC4 694 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 ABHD15Q6UXT9 468 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 CCDC186Q7Z3E2 898 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
CCBE1-203ENST00000589116 SRRTQ9BXP5 876 aaKnown RBP13.35□□□□□ -0.27
CCBE1-203ENST00000589116 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
CCBE1-203ENST00000589116 MAGEC2Q9UBF1 373 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms