RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 ALAS1P13196 640 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 YBX3P16989 372 aaKnown RBP eCLIP16.8■□□□□ 0.28
MBD1-217ENST00000588937 KIF11P52732 1056 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 KCNH2Q12809 1159 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
MBD1-217ENST00000588937 NFIL3Q16649 462 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 PCNX4Q63HM2 1172 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 MYCT1Q8N699 235 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 ARHGAP20Q9P2F6 1191 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 MYO6Q9UM54 1294 aa16.8■□□□□ 0.28
MBD1-217ENST00000588937 NFIBO00712 420 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 EGFRP00533 1210 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 NR3C1P04150 777 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 ERCC3P19447 782 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 EIF4A3P38919 411 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 SLC9C1Q4G0N8 1177 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 SFMBT2Q5VUG0 894 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 SAMD7Q7Z3H4 446 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 CPXCR1Q8N123 301 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 IFIH1Q9BYX4 1025 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 LUC7LQ9NQ29 371 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 PCDHA13Q9Y5I0 950 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 GJA3Q9Y6H8 435 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 ARHGEF35A5YM69 484 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 AFPP02771 609 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 SERPING1P05155 500 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 XRCC5P13010 732 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 ITGB5P18084 799 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 VCAM1P19320 739 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 HOXD13P35453 343 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 CLCN6P51797 869 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 ZNF131P52739 623 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 MTMR2Q13614 643 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 TBC1D10BQ4KMP7 808 aaPredicted RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 TMCO3Q6UWJ1 677 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 MIER3Q7Z3K6 550 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 APOBEC3FQ8IUX4 373 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 SECISBP2LQ93073 1101 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 PURBQ96QR8 312 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 LXNQ9BS40 222 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 RAVER2Q9HCJ3 691 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 KCNH7Q9NS40 1196 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 TRIM10Q9UDY6 481 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 SCAF8Q9UPN6 1271 aaKnown RBP16.79■□□□□ 0.28
MBD1-217ENST00000588937 UBIAD1Q9Y5Z9 338 aa16.79■□□□□ 0.28
MBD1-217ENST00000588937 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 CTAGE15A4D2H0 777 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 PPP1R12BO60237 982 aaPredicted RBP16.78■□□□□ 0.28
MBD1-217ENST00000588937 P4HBP07237 508 aaKnown RBP16.78■□□□□ 0.28
MBD1-217ENST00000588937 CTAGE8P0CG41 777 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 GUCY2CP25092 1073 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 AMPD2Q01433 879 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 BMS1Q14692 1282 aaKnown RBP16.78■□□□□ 0.28
MBD1-217ENST00000588937 CTAGE6Q86UF2 777 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 CTAGE4Q8IX94 777 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 SCYL3Q8IZE3 742 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 CCDC155Q8N6L0 562 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 SYTL5Q8TDW5 730 aaPredicted RBP16.78■□□□□ 0.28
MBD1-217ENST00000588937 RPAP3Q9H6T3 665 aaPredicted RBP16.78■□□□□ 0.28
MBD1-217ENST00000588937 ZSWIM4Q9H7M6 989 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 AGO4Q9HCK5 861 aaKnown RBP16.78■□□□□ 0.28
MBD1-217ENST00000588937 PLCB1Q9NQ66 1216 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 PICK1Q9NRD5 415 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 TBC1D22BQ9NU19 505 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 COL20A1Q9P218 1284 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 PCDHB13Q9Y5F0 798 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 ASTN1O14525 1302 aa16.78■□□□□ 0.28
MBD1-217ENST00000588937 NOL4O94818 638 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 PLEKP08567 350 aaPredicted RBP16.77■□□□□ 0.28
MBD1-217ENST00000588937 POLR2FP61218 127 aaKnown RBP16.77■□□□□ 0.28
MBD1-217ENST00000588937 CYP27A1Q02318 531 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 TKFCQ3LXA3 575 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
MBD1-217ENST00000588937 PAPD7Q5XG87 772 aaKnown RBP16.77■□□□□ 0.28
MBD1-217ENST00000588937 TRAPPC11Q7Z392 1133 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 FAM178BQ8IXR5 827 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 TRIM58Q8NG06 486 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 GOLGA5Q8TBA6 731 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 LACRTQ9GZZ8 138 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 PUF60Q9UHX1 559 aaKnown RBP16.77■□□□□ 0.28
MBD1-217ENST00000588937 ZNF112Q9UJU3 913 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 SAR1BQ9Y6B6 198 aa16.77■□□□□ 0.28
MBD1-217ENST00000588937 ATP8B1O43520 1251 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 TACC1O75410 805 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 TUBBP07437 444 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 MAGEA1P43355 309 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 BACE1P56817 501 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 MTMR1Q13613 665 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 XRRA1Q6P2D8 792 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 SLC30A10Q6XR72 485 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 HS2ST1Q7LGA3 356 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 MKNK1Q9BUB5 465 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 NLRC4Q9NPP4 1024 aa16.77■□□□□ 0.27
MBD1-217ENST00000588937 ZC3H4Q9UPT8 1303 aaKnown RBP16.76■□□□□ 0.27
MBD1-217ENST00000588937 SFI1A8K8P3 1242 aa16.76■□□□□ 0.27
MBD1-217ENST00000588937 ZNF263O14978 683 aa16.76■□□□□ 0.27
MBD1-217ENST00000588937 PJA2O43164 708 aa16.76■□□□□ 0.27
MBD1-217ENST00000588937 AKAP3O75969 853 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms