RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 COL1A2P08123 1366 aa11.4□□□□□ -0.59
TPM4-207ENST00000588032 SLC37A4O43826 429 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
TPM4-207ENST00000588032 CXCL10P02778 98 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 U2AF2P26368 475 aaKnown RBP eCLIP11.39□□□□□ -0.59
TPM4-207ENST00000588032 TRAPPC10P48553 1259 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 GUCY1B3Q02153 619 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 PPP2R5CQ13362 524 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 ORC2Q13416 577 aaPredicted RBP11.39□□□□□ -0.59
TPM4-207ENST00000588032 FAM26DQ5JW98 314 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 MARCH8Q5T0T0 291 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 DEFB128Q7Z7B8 93 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 NME8Q8N427 588 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
TPM4-207ENST00000588032 UNC45AQ9H3U1 944 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 DOCK5Q9H7D0 1870 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 SMC3Q9UQE7 1217 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 PCDHA2Q9Y5H9 948 aa11.39□□□□□ -0.59
TPM4-207ENST00000588032 SMIM35A0A1B0GVV1 85 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 FAM205CA6NFA0 338 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 CHMP2AO43633 222 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 NEMFO60524 1076 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 EFCAB14O75071 495 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 BAIAP3O94812 1187 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 ATP4AP20648 1035 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 IGBP1P78318 339 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 IER5Q5VY09 327 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 TRAF7Q6Q0C0 670 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 FAM43BQ6ZT52 329 aaPredicted RBP11.38□□□□□ -0.59
TPM4-207ENST00000588032 OTOP2Q7RTS6 562 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 NOSTRINQ8IVI9 506 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 HAS1Q92839 578 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 WNT8BQ93098 351 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 VWCEQ96DN2 955 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 NOL7Q9UMY1 257 aaKnown RBP11.38□□□□□ -0.59
TPM4-207ENST00000588032 PCDHA12Q9UN75 941 aa11.38□□□□□ -0.59
TPM4-207ENST00000588032 IGSF9BQ9UPX0 1349 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 ABHD14A-ACY1A0A1B0GW23 586 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 H3BQV1 296 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 M0QZ92 97 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 SOX1O00570 391 aaPredicted RBP11.37□□□□□ -0.59
TPM4-207ENST00000588032 MAGEB2O15479 319 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 NBNO60934 754 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 KLRC1P26715 233 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 GJB2P29033 226 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 PSMC5P62195 406 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 CUL4AQ13619 759 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 IKBKEQ14164 716 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 GPNMBQ14956 572 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 EPHA7Q15375 998 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 CALCRLQ16602 461 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 FAM109BQ6ICB4 259 aaPredicted RBP11.37□□□□□ -0.59
TPM4-207ENST00000588032 CNKSR3Q6P9H4 555 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 PHOSPHO2Q8TCD6 241 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 DNAJB3Q8WWF6 145 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 GJA10Q969M2 543 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 VAV3Q9UKW4 847 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 SLC4A7Q9Y6M7 1214 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 SQORQ9Y6N5 450 aa11.37□□□□□ -0.59
TPM4-207ENST00000588032 CEP290O15078 2479 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 ZNF862O60290 1169 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 OATP04181 439 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 P4HBP07237 508 aaKnown RBP11.36□□□□□ -0.59
TPM4-207ENST00000588032 PDCP20941 246 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 QARSP47897 775 aaKnown RBP11.36□□□□□ -0.59
TPM4-207ENST00000588032 PRKCEQ02156 737 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 XKR3Q5GH77 459 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
TPM4-207ENST00000588032 RUFY4Q6ZNE9 571 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 USP38Q8NB14 1042 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 SEPT8Q92599 483 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 APBB2Q92870 758 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 INTS4Q96HW7 963 aaKnown RBP11.36□□□□□ -0.59
TPM4-207ENST00000588032 LRCH3Q96II8 777 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 MTMR9Q96QG7 549 aa11.36□□□□□ -0.59
TPM4-207ENST00000588032 NIFKQ9BYG3 293 aaKnown RBP11.36□□□□□ -0.59
TPM4-207ENST00000588032 TTC12Q9H892 705 aaPredicted RBP11.36□□□□□ -0.59
TPM4-207ENST00000588032 TMEM265A0A087WTH1 108 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 ZBTB42B2RXF5 422 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 K7ELQ4 463 aaPredicted RBP11.35□□□□□ -0.59
TPM4-207ENST00000588032 EML1O00423 815 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 CHRNA1P02708 482 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 CTSHP09668 335 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 ATP2B1P20020 1258 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 TMOD1P28289 359 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 MCM7P33993 719 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 TXKP42681 527 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 MRPS6P82932 125 aaKnown RBP11.35□□□□□ -0.59
TPM4-207ENST00000588032 SPIRE1Q08AE8 756 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 MBTPS1Q14703 1052 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 TTC38Q5R3I4 469 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 C4orf19Q8IY42 314 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 EXOC8Q8IYI6 725 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 NEK9Q8TD19 979 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 SNX21Q969T3 373 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms