RNA–Protein interactions for RNA: ENST00000587700.1

RFX2-209, Transcript of regulatory factor X2, human

TSL 2

Gene RFX2, Length 2,376 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-209	ENST00000587700	ZNF287	Q9HBT7	754 aa		10.15	□□□□□ -0.78
RFX2-209	ENST00000587700	TMEM260	Q9NX78	707 aa		10.15	□□□□□ -0.78
RFX2-209	ENST00000587700	BIN2	Q9UBW5	565 aa	Predicted RBP	10.15	□□□□□ -0.78
RFX2-209	ENST00000587700	SALL4	Q9UJQ4	1053 aa		10.15	□□□□□ -0.78
RFX2-209	ENST00000587700	GGA2	Q9UJY4	613 aa		10.15	□□□□□ -0.78
RFX2-209	ENST00000587700	DDX60L	Q5H9U9	1706 aa	Known RBP	10.15	□□□□□ -0.78
RFX2-209	ENST00000587700	FAM196B	A6NMK8	535 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	NKRF	O15226	690 aa	Known RBP eCLIP	10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	NCK2	O43639	380 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	SLC1A4	P43007	532 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	PDIA5	Q14554	519 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	TMEM266	Q2M3C6	531 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	YTHDF3	Q7Z739	585 aa	Known RBP	10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	COL23A1	Q86Y22	540 aa	Predicted RBP	10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	PNMA5	Q96PV4	448 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	RAB34	Q9BZG1	259 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	ZMIZ1	Q9ULJ6	1067 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	PCDHGC5	Q9Y5F6	944 aa		10.15	□□□□□ -0.79
RFX2-209	ENST00000587700	TNS1	Q9HBL0	1735 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	HMGB1P1	B2RPK0	211 aa	Predicted RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	NDUFAB1	O14561	156 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	HEXIM1	O94992	359 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	CXCR5	P32302	372 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	LIG3	P49916	1009 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	RASSF7	Q02833	373 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	NFIA	Q12857	509 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	PLEKHG6	Q3KR16	790 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	SLC27A3	Q5K4L6	730 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	SFMBT2	Q5VUG0	894 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	DPP8	Q6V1X1	898 aa	Predicted RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	JAZF1	Q86VZ6	243 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	ZFPM1	Q8IX07	1006 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	RAD54L	Q92698	747 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	COA7	Q96BR5	231 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	CDK5RAP3	Q96JB5	506 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	CEP63	Q96MT8	703 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	CCDC43	Q96MW1	224 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	UIMC1	Q96RL1	719 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	TINF2	Q9BSI4	451 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	EHD4	Q9H223	541 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	DBNDD1	Q9H9R9	158 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	GPCPD1	Q9NPB8	672 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	GAK	O14976	1311 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	BTNL10	A8MVZ5	291 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	FSBP	O95073	299 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	GNA14	O95837	355 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	GLI1	P08151	1106 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	MYB	P10242	640 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	PDHB	P11177	359 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	IBSP	P21815	317 aa	Predicted RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	CARS	P49589	748 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	TNNC1	P63316	161 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	ATP2B2	Q01814	1243 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	GFPT1	Q06210	699 aa	Predicted RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	KCNMA1	Q12791	1236 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	CDC37	Q16543	378 aa	Predicted RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	TMEM119	Q4V9L6	283 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	ZCWPW2	Q504Y3	356 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	MEI1	Q5TIA1	1274 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	LRIG3	Q6UXM1	1119 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	RPUSD2	Q8IZ73	545 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	TBCK	Q8TEA7	893 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	HPS3	Q969F9	1004 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	INPP4A	Q96PE3	977 aa	Predicted RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	CRAMP1	Q96RY5	1269 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	TMEM106C	Q9BVX2	250 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	EPN3	Q9H201	632 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	SPON1	Q9HCB6	807 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	EPB41L5	Q9HCM4	733 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	SMARCAL1	Q9NZC9	954 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	EHD2	Q9NZN4	543 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	ATP6V0A2	Q9Y487	856 aa		10.14	□□□□□ -0.79
RFX2-209	ENST00000587700	NAV1	Q8NEY1	1877 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	KLRG2	A4D1S0	409 aa	Predicted RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	ZNF233	A6NK53	670 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	KIAA0754	O94854	1291 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	SLC16A2	P36021	539 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	HSPA9	P38646	679 aa	Known RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	FKBP3	Q00688	224 aa	Known RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	PDCL	Q13371	301 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	R3HDM1	Q15032	1099 aa	Known RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	CALCRL	Q16602	461 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	C4orf46	Q504U0	113 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	TDRD12	Q587J7	1177 aa	Known RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	LDLRAD1	Q5T700	205 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	MYOCD	Q8IZQ8	938 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	REXO1	Q8N1G1	1221 aa	Known RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	PIP4P2	Q8N4L2	257 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	TBC1D22A	Q8WUA7	517 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	KAT2B	Q92831	832 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	GJA10	Q969M2	543 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	FAM163A	Q96GL9	167 aa	Predicted RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	ATP6V1G3	Q96LB4	118 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	SEC63	Q9UGP8	760 aa	Known RBP	10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	NFU1	Q9UMS0	254 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	COL4A3BP	Q9Y5P4	624 aa		10.13	□□□□□ -0.79
RFX2-209	ENST00000587700	MEFV	O15553	781 aa	Predicted RBP	10.12	□□□□□ -0.79
RFX2-209	ENST00000587700	MMP10	P09238	476 aa		10.12	□□□□□ -0.79
RFX2-209	ENST00000587700	PLCG2	P16885	1265 aa		10.12	□□□□□ -0.79

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