RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 JAM2P57087 298 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 LACTBP83111 547 aaPredicted RBP6.38□□□□□ -1.39
VMP1-205ENST00000587470 SF3A1Q15459 793 aaKnown RBP6.38□□□□□ -1.39
VMP1-205ENST00000587470 FIGNQ5HY92 759 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 SLFN13Q68D06 897 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 DPP8Q6V1X1 898 aaPredicted RBP6.38□□□□□ -1.39
VMP1-205ENST00000587470 JMYQ8N9B5 988 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 TACO1Q9BSH4 297 aaKnown RBP6.38□□□□□ -1.39
VMP1-205ENST00000587470 KATNBL1Q9H079 304 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 TMPRSS5Q9H3S3 457 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 SLC39A2Q9NP94 309 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 TOPBP1Q92547 1522 aa6.38□□□□□ -1.39
VMP1-205ENST00000587470 DISP3Q9P2K9 1392 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.37□□□□□ -1.39
VMP1-205ENST00000587470 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.37□□□□□ -1.39
VMP1-205ENST00000587470 CCDC66A2RUB6 948 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 ZNF561-AS1K7EIQ3 104 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 KRT15P19012 456 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 DNM2P50570 870 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 RALYLQ86SE5 291 aaKnown RBP6.37□□□□□ -1.39
VMP1-205ENST00000587470 CIR1Q86X95 450 aaPredicted RBP6.37□□□□□ -1.39
VMP1-205ENST00000587470 REXO1L1PQ8IX06 675 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 MAGEB10Q96LZ2 347 aaPredicted RBP6.37□□□□□ -1.39
VMP1-205ENST00000587470 SLC52A2Q9HAB3 445 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 ARHGAP28Q9P2N2 729 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 NDOR1Q9UHB4 597 aa6.37□□□□□ -1.39
VMP1-205ENST00000587470 KDM6BO15054 1643 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 SYNJ2O15056 1496 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 GPR42O15529 346 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 CLASP2O75122 1294 aaKnown RBP6.36□□□□□ -1.39
VMP1-205ENST00000587470 ZNF20P17024 532 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 PUM1Q14671 1186 aaKnown RBP eCLIP6.36□□□□□ -1.39
VMP1-205ENST00000587470 TRIM61Q5EBN2 209 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 GSTCDQ8NEC7 633 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 ZSWIM2Q8NEG5 633 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
VMP1-205ENST00000587470 DVL3Q92997 716 aaPredicted RBP6.36□□□□□ -1.39
VMP1-205ENST00000587470 ST6GALNAC2Q9UJ37 374 aa6.36□□□□□ -1.39
VMP1-205ENST00000587470 C1QTNF3-AMACRE9PGA6 284 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 CUTAO60888 179 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 CSF2RBP32927 897 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 HERVK_113P62684 666 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 ICAM4Q14773 271 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 DNERQ8NFT8 737 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 PMFBP1Q8TBY8 1022 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 PTPN18Q99952 460 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 SEC61A2Q9H9S3 476 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 SMURF1Q9HCE7 757 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 SLC4A7Q9Y6M7 1214 aa6.35□□□□□ -1.39
VMP1-205ENST00000587470 TARBP1Q13395 1621 aaKnown RBP6.35□□□□□ -1.39
VMP1-205ENST00000587470 ADGRL1O94910 1474 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 KCNQ2O43526 872 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 C4BPAP04003 597 aaKnown RBP6.34□□□□□ -1.39
VMP1-205ENST00000587470 TNFRSF1AP19438 455 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 PTGS1P23219 599 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 POLD1P28340 1107 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 USP10Q14694 798 aaKnown RBP6.34□□□□□ -1.39
VMP1-205ENST00000587470 IFNL2Q8IZJ0 200 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 SLC7A14Q8TBB6 771 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 CARD11Q9BXL7 1154 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 INCENPQ9NQS7 918 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 GALNT8Q9NY28 637 aa6.34□□□□□ -1.39
VMP1-205ENST00000587470 ESYT3A0FGR9 886 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 PRAMEF25A6NGN4 478 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 KCNK3O14649 394 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 CNOT4O95628 575 aaKnown RBP6.33□□□□□ -1.4
VMP1-205ENST00000587470 AOAHP28039 575 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 TOP3AQ13472 1001 aaPredicted RBP6.33□□□□□ -1.4
VMP1-205ENST00000587470 CXXC5Q7LFL8 322 aaKnown RBP6.33□□□□□ -1.4
VMP1-205ENST00000587470 GPR155Q7Z3F1 870 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 MRPL4Q9BYD3 311 aaKnown RBP6.33□□□□□ -1.4
VMP1-205ENST00000587470 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
VMP1-205ENST00000587470 MEGF9Q9H1U4 602 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 CD248Q9HCU0 757 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 BTBD7Q9P203 1132 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 SFMBT1Q9UHJ3 866 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 COQ6Q9Y2Z9 468 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 SNAPC4Q5SXM2 1469 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 ABCC10Q5T3U5 1492 aa6.33□□□□□ -1.4
VMP1-205ENST00000587470 TDRD9Q8NDG6 1382 aaKnown RBP6.32□□□□□ -1.4
VMP1-205ENST00000587470 PATE3B3GLJ2 98 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 RASGRP1O95267 797 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 NPTXRO95502 500 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 WDR72Q3MJ13 1102 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 C2orf27AQ580R0 203 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 SCLYQ96I15 445 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 CDK5RAP1Q96SZ6 601 aaKnown RBP6.32□□□□□ -1.4
VMP1-205ENST00000587470 DEF6Q9H4E7 631 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 FBXO10Q9UK96 956 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 PRDM2Q13029 1718 aa6.32□□□□□ -1.4
VMP1-205ENST00000587470 MAGI1Q96QZ7 1491 aaPredicted RBP6.32□□□□□ -1.4
VMP1-205ENST00000587470 ZNF888P0CJ79 500 aaPredicted RBP6.31□□□□□ -1.4
VMP1-205ENST00000587470 SEC23AQ15436 765 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 ZNF568Q3ZCX4 644 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 NOSTRINQ8IVI9 506 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 CISD2Q8N5K1 135 aaKnown RBP6.31□□□□□ -1.4
VMP1-205ENST00000587470 WNK4Q96J92 1243 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 LMF1Q96S06 567 aa6.31□□□□□ -1.4
VMP1-205ENST00000587470 BTBD2Q9BX70 525 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms