RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 PKN1Q16512 942 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 PRR16Q569H4 304 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 PDXDC2PQ6P474 469 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 CPLX2Q6PUV4 134 aaKnown RBP12.1□□□□□ -0.47
ZNF540-205ENST00000587220 TSHZ1Q6ZSZ6 1077 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 TRAPPC12Q8WVT3 735 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 C17orf80Q9BSJ5 609 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 ZSWIM6Q9HCJ5 1215 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 ZNF302Q9NR11 478 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 TBC1D22BQ9NU19 505 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 LMCD1Q9NZU5 365 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 VPS54Q9P1Q0 977 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 COG5Q9UP83 839 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
ZNF540-205ENST00000587220 IGLV3-22A0A075B6J6 115 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 TNFRSF10AO00220 468 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 LPXNO60711 386 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 SSRP1Q08945 709 aaKnown RBP12.09□□□□□ -0.47
ZNF540-205ENST00000587220 MGAT3Q09327 533 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 NTRK3Q16288 839 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 PTPROQ16827 1216 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 FBXO47Q5MNV8 452 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 SWSAP1Q6NVH7 229 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
ZNF540-205ENST00000587220 RASGRP4Q8TDF6 673 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 HLA-CQ95604 372 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 UHRF1Q96T88 793 aaPredicted RBP12.09□□□□□ -0.47
ZNF540-205ENST00000587220 UPF3BQ9BZI7 483 aaKnown RBP12.09□□□□□ -0.47
ZNF540-205ENST00000587220 SH3GLB2Q9NR46 395 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 PCDHA2Q9Y5H9 948 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
ZNF540-205ENST00000587220 MUC3AQ02505 3323 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 TTC28Q96AY4 2481 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 HBP1O60381 514 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 ATG7O95352 703 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 PSAPP07602 524 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 KLRC1P26715 233 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 CD52P31358 61 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 EVCP57679 992 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 KRT76Q01546 638 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 PAK2Q13177 524 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 STK3Q13188 491 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-205ENST00000587220 EPC2Q52LR7 807 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-205ENST00000587220 MTHFD1LQ6UB35 978 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 ABHD15Q6UXT9 468 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
ZNF540-205ENST00000587220 CCDC60Q8IWA6 550 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-205ENST00000587220 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
ZNF540-205ENST00000587220 NME8Q8N427 588 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 FIBCD1Q8N539 461 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 FTHL17Q9BXU8 183 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.48
ZNF540-205ENST00000587220 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 GINS2Q9Y248 185 aa12.08□□□□□ -0.48
ZNF540-205ENST00000587220 COL1A2P08123 1366 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 SMIM35A0A1B0GVV1 85 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 ENPP3O14638 875 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 ADAMTS3O15072 1205 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
ZNF540-205ENST00000587220 DEXIO95424 95 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 KCNQ1P51787 676 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 ZNF484Q5JVG2 852 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 NLRC5Q86WI3 1866 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 TMEM192Q8IY95 271 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
ZNF540-205ENST00000587220 LARP6Q9BRS8 491 aaKnown RBP12.07□□□□□ -0.48
ZNF540-205ENST00000587220 C22orf23Q9BZE7 217 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 AGO3Q9H9G7 860 aaKnown RBP12.07□□□□□ -0.48
ZNF540-205ENST00000587220 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 CEP131Q9UPN4 1083 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 PCDHA10Q9Y5I2 948 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 SQORQ9Y6N5 450 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 IGSF9BQ9UPX0 1349 aa12.07□□□□□ -0.48
ZNF540-205ENST00000587220 MYH9P35579 1960 aaKnown RBP12.07□□□□□ -0.48
ZNF540-205ENST00000587220 COL4A6Q14031 1691 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 RALGAPA2Q2PPJ7 1873 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 WDR64B1ANS9 1081 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 GAS7O60861 476 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 CDKL5O76039 1030 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 IBSPP21815 317 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-205ENST00000587220 CIITAP33076 1130 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 CTNNB1P35222 781 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 USP11P51784 963 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 NFX1Q12986 1120 aaKnown RBP12.06□□□□□ -0.48
ZNF540-205ENST00000587220 GPM6BQ13491 265 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 BTG3Q14201 252 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-205ENST00000587220 METTL13Q8N6R0 699 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 BBXQ8WY36 941 aaPredicted RBP12.06□□□□□ -0.48
ZNF540-205ENST00000587220 MRPL38Q96DV4 380 aaKnown RBP12.06□□□□□ -0.48
ZNF540-205ENST00000587220 FAM167AQ96KS9 214 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms