RNA–Protein interactions for RNA: ENST00000585844.1

CCDC130-203, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-203ENST00000585844 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
CCDC130-203ENST00000585844 USP34Q70CQ2 3546 aa18.33■□□□□ 0.53
CCDC130-203ENST00000585844 PPFIA3O75145 1194 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 SMARCA1P28370 1054 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 TMEM62Q0P6H9 643 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 FAM43BQ6ZT52 329 aaPredicted RBP18.33■□□□□ 0.52
CCDC130-203ENST00000585844 ATP8B4Q8TF62 1192 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 ASIC4Q96FT7 647 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
CCDC130-203ENST00000585844 CELF4Q9BZC1 486 aaKnown RBP18.33■□□□□ 0.52
CCDC130-203ENST00000585844 TLR9Q9NR96 1032 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 AAASQ9NRG9 546 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 PCDHB12Q9Y5F1 795 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 PCDHA2Q9Y5H9 948 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 UBIAD1Q9Y5Z9 338 aa18.33■□□□□ 0.52
CCDC130-203ENST00000585844 KDM3AQ9Y4C1 1321 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 LOXHD1Q8IVV2 1947 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 E7EWF7 191 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 PER2O15055 1255 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 GFRA3O60609 400 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 KIF5BP33176 963 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 GATMP50440 423 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 NME8Q8N427 588 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 CTCFLQ8NI51 663 aaPredicted RBP18.32■□□□□ 0.52
CCDC130-203ENST00000585844 SUSD6Q92537 303 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 NEK1Q96PY6 1258 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 PCYT2Q99447 389 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 AZI2Q9H6S1 392 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 PKD2L1Q9P0L9 805 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 TRPC6Q9Y210 931 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 PCDHB7Q9Y5E2 793 aa18.32■□□□□ 0.52
CCDC130-203ENST00000585844 AVPR2P30518 371 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 SARSP49591 514 aaKnown RBP18.31■□□□□ 0.52
CCDC130-203ENST00000585844 VCPP55072 806 aaKnown RBP18.31■□□□□ 0.52
CCDC130-203ENST00000585844 PTPN21Q16825 1174 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 DUSP6Q16828 381 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 SPOUT1Q5T280 376 aaKnown RBP18.31■□□□□ 0.52
CCDC130-203ENST00000585844 PDE12Q6L8Q7 609 aaKnown RBP18.31■□□□□ 0.52
CCDC130-203ENST00000585844 IGDCC4Q8TDY8 1250 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 LZTS2Q9BRK4 669 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 TMX1Q9H3N1 280 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 PSTPIP2Q9H939 334 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 JPH1Q9HDC5 661 aaPredicted RBP18.31■□□□□ 0.52
CCDC130-203ENST00000585844 JADE2Q9NQC1 790 aa18.31■□□□□ 0.52
CCDC130-203ENST00000585844 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
CCDC130-203ENST00000585844 SMIM35A0A1B0GVV1 85 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 FGF18O76093 207 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 DDAH1O94760 285 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 IGHDP01880 384 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 SRGAP2BP0DMP2 458 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 RBM10P98175 930 aaKnown RBP18.3■□□□□ 0.52
CCDC130-203ENST00000585844 KRT76Q01546 638 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 PLPPR4Q7Z2D5 763 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 VN1R2Q8NFZ6 395 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 FAM86C1Q9NVL1 165 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 SLC9A2Q9UBY0 812 aa18.3■□□□□ 0.52
CCDC130-203ENST00000585844 FNDC1Q4ZHG4 1894 aaPredicted RBP18.29■□□□□ 0.52
CCDC130-203ENST00000585844 SPDYE3A6NKU9 549 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 GNAQP50148 359 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 NUBP1P53384 320 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 ANTXR2P58335 489 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 ERVFC1P60507 584 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 NFX1Q12986 1120 aaKnown RBP18.29■□□□□ 0.52
CCDC130-203ENST00000585844 PLCB4Q15147 1175 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 TMEM266Q2M3C6 531 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 TMEM184AQ6ZMB5 413 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 ZNF654Q8IZM8 581 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 TRAPPC12Q8WVT3 735 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 ATOH1Q92858 354 aaPredicted RBP18.29■□□□□ 0.52
CCDC130-203ENST00000585844 RGS18Q9NS28 235 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 C1orf112Q9NSG2 853 aa18.29■□□□□ 0.52
CCDC130-203ENST00000585844 TBKBP1A7MCY6 615 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 FSCN2O14926 492 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 IBSPP21815 317 aaPredicted RBP18.28■□□□□ 0.52
CCDC130-203ENST00000585844 STAT5BP51692 787 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 PTH1RQ03431 593 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 ODR4Q5SWX8 454 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 MTHFD1LQ6UB35 978 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 THNSL1Q8IYQ7 743 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 RUFY2Q8WXA3 655 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 MYL10Q9BUA6 226 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 S1PR5Q9H228 398 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 LY9Q9HBG7 655 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 ERVK-5Q9HDB9 667 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 TMEM260Q9NX78 707 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 PCDHA6Q9UN73 950 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 PCDHA8Q9Y5H6 950 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
CCDC130-203ENST00000585844 MGEA5O60502 916 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 RPS6KA5O75582 802 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 ACTR2P61160 394 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 KCNC3Q14003 757 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 UBE2SQ16763 222 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 ANKRD54Q6NXT1 300 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 SLC24A5Q71RS6 500 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 MB21D2Q8IYB1 491 aaPredicted RBP18.27■□□□□ 0.52
CCDC130-203ENST00000585844 SRBD1Q8N5C6 995 aaKnown RBP18.27■□□□□ 0.52
CCDC130-203ENST00000585844 COLGALT1Q8NBJ5 622 aa18.27■□□□□ 0.52
CCDC130-203ENST00000585844 RASGRP4Q8TDF6 673 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms