RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 CFAP43Q8NDM7 1665 aa5.59□□□□□ -1.52
TTC39C-210ENST00000584424 YEATS2Q9ULM3 1422 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 NKRFO15226 690 aaKnown RBP eCLIP5.58□□□□□ -1.52
TTC39C-210ENST00000584424 SUSD5O60279 629 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 RAMP2O60895 175 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 GRIA2P42262 883 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 HNRNPA0Q13151 305 aaKnown RBP5.58□□□□□ -1.52
TTC39C-210ENST00000584424 TOP3AQ13472 1001 aaPredicted RBP5.58□□□□□ -1.52
TTC39C-210ENST00000584424 SLC35F1Q5T1Q4 408 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 USP53Q70EK8 1073 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 SGMS1Q86VZ5 419 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 FAM178BQ8IXR5 827 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 SLC2A4RGQ9NR83 387 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 PUF60Q9UHX1 559 aaKnown RBP5.58□□□□□ -1.52
TTC39C-210ENST00000584424 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.58□□□□□ -1.52
TTC39C-210ENST00000584424 SHROOM2Q13796 1616 aa5.58□□□□□ -1.52
TTC39C-210ENST00000584424 BCORL1Q5H9F3 1711 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 MATN2O00339 956 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 SCAMP3O14828 347 aaKnown RBP5.57□□□□□ -1.52
TTC39C-210ENST00000584424 CUTAO60888 179 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 DDAH1O94760 285 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 DNAJA1P31689 397 aaKnown RBP5.57□□□□□ -1.52
TTC39C-210ENST00000584424 RPS19P39019 145 aaKnown RBP5.57□□□□□ -1.52
TTC39C-210ENST00000584424 GJA8P48165 433 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 SPIRE1Q08AE8 756 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 DUSP8Q13202 625 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 TBR1Q16650 682 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 UHMK1Q8TAS1 419 aaKnown RBP5.57□□□□□ -1.52
TTC39C-210ENST00000584424 KCTD13Q8WZ19 329 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 TTPALQ9BTX7 342 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 PHF20Q9BVI0 1012 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 KIAA1683Q9H0B3 1180 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 GPR27Q9NS67 375 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 DSEQ9UL01 958 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 TEX14Q8IWB6 1497 aa5.57□□□□□ -1.52
TTC39C-210ENST00000584424 GLI2P10070 1586 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 ABCC8Q09428 1581 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 ACOT7O00154 380 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 ARHGAP6O43182 974 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 PDE6AP16499 860 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 GRK2P25098 689 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 GRK3P35626 688 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 HHEXQ03014 270 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 FSTL1Q12841 308 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 WDR72Q3MJ13 1102 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 DPP8Q6V1X1 898 aaPredicted RBP5.56□□□□□ -1.52
TTC39C-210ENST00000584424 SEC16BQ96JE7 1060 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 SCYL1Q96KG9 808 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 PLA2G3Q9NZ20 509 aa5.56□□□□□ -1.52
TTC39C-210ENST00000584424 DNMBPQ6XZF7 1577 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 SMAD7O15105 426 aaKnown RBP5.55□□□□□ -1.52
TTC39C-210ENST00000584424 BMP5P22003 454 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 ADCY8P40145 1251 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 KCNQ1P51787 676 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 KCTD1Q719H9 257 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 METTL16Q86W50 562 aaKnown RBP5.55□□□□□ -1.52
TTC39C-210ENST00000584424 TMEM176AQ96HP8 235 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 IER2Q9BTL4 223 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 ACTR10Q9NZ32 417 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 STRIP2Q9ULQ0 834 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 MRVI1Q9Y6F6 885 aa5.55□□□□□ -1.52
TTC39C-210ENST00000584424 GRIN2BQ13224 1484 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 RAD54L2Q9Y4B4 1467 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 HMGCRP04035 888 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 ETV4P43268 484 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 CRHR2Q13324 411 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 D2HGDHQ8N465 521 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 VOPP1Q96AW1 172 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 NAF1Q96HR8 494 aaKnown RBP5.54□□□□□ -1.52
TTC39C-210ENST00000584424 CD244Q9BZW8 370 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 PARPBPQ9NWS1 579 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 CEP72Q9P209 647 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 ARHGAP28Q9P2N2 729 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 CDC42EP3Q9UKI2 254 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 GIT1Q9Y2X7 761 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 MAP3K4Q9Y6R4 1608 aa5.54□□□□□ -1.52
TTC39C-210ENST00000584424 CAPN14A8MX76 684 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 PPP2R2AP63151 447 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 MAP4K2Q12851 820 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 GRM7Q14831 915 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 MRM1Q6IN84 353 aaKnown RBP5.53□□□□□ -1.52
TTC39C-210ENST00000584424 KCNT2Q6UVM3 1135 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 PCSK4Q6UW60 755 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 LARP4Q71RC2 724 aaKnown RBP eCLIP5.53□□□□□ -1.52
TTC39C-210ENST00000584424 NT5DC4Q86YG4 428 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 SCUBE1Q8IWY4 988 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 MICAL1Q8TDZ2 1067 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 PRRX2Q99811 253 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 AURKAIP1Q9NWT8 199 aaPredicted RBP5.53□□□□□ -1.52
TTC39C-210ENST00000584424 PBRM1Q86U86 1689 aa5.53□□□□□ -1.52
TTC39C-210ENST00000584424 WDR97A6NE52 1622 aa5.52□□□□□ -1.53
TTC39C-210ENST00000584424 POLA1P09884 1462 aaPredicted RBP5.52□□□□□ -1.53
TTC39C-210ENST00000584424 PRG4Q92954 1404 aaPredicted RBP5.52□□□□□ -1.53
TTC39C-210ENST00000584424 AGRPO00253 132 aa5.52□□□□□ -1.53
TTC39C-210ENST00000584424 RECKO95980 971 aa5.52□□□□□ -1.53
TTC39C-210ENST00000584424 KRT4P19013 534 aa5.52□□□□□ -1.53
TTC39C-210ENST00000584424 IL12RB1P42701 662 aa5.52□□□□□ -1.53
TTC39C-210ENST00000584424 DBPQ10586 325 aaPredicted RBP5.52□□□□□ -1.53
TTC39C-210ENST00000584424 NFYCQ13952 458 aa5.52□□□□□ -1.53
TTC39C-210ENST00000584424 KIZQ2M2Z5 673 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms