RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SLC3A2P08195 630 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 TBC1D8BQ0IIM8 1120 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 CDC37Q16543 378 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 TMC7Q7Z402 723 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 PLCD3Q8N3E9 789 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 RGS22Q8NE09 1264 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 MRPS27Q92552 414 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 TMX1Q9H3N1 280 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 DLGAP2Q9P1A6 1054 aa16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-213ENST00000580446 PRR5-ARHGAP8B1AHC4 643 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 FGFR1P11362 822 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 EPCAMP16422 314 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 TGM1P22735 817 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 ARHGAP8P85298 464 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 RRP12Q5JTH9 1297 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 ATAT1Q5SQI0 421 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 KIAA1841Q6NSI8 718 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 PADI3Q9ULW8 664 aa16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-213ENST00000580446 KIAA1217Q5T5P2 1943 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 RNF113AO15541 343 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 MGEA5O60502 916 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 TOP1P11387 765 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 MARK3P27448 753 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 HOXA13P31271 388 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 IGBP1P78318 339 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 MRPS6P82932 125 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 LPAL2Q16609 132 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 CYFIP1Q7L576 1253 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 AUTS2Q8WXX7 1259 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 PDCD2LQ9BRP1 358 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 CWH43Q9H720 699 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 TOMM22Q9NS69 142 aa16.41■□□□□ 0.22
CSNK1D-213ENST00000580446 C2orf71A6NGG8 1288 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 GNAT2P19087 354 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 NOVP48745 357 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 GPR20Q99678 358 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 NACAP1Q9BZK3 213 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 ANGPTL2Q9UKU9 493 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 USTQ9Y2C2 406 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 SIT1Q9Y3P8 196 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 PCDHB7Q9Y5E2 793 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 MYH7BA7E2Y1 1941 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 MYH7P12883 1935 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 ABCB11O95342 1321 aa16.4■□□□□ 0.22
CSNK1D-213ENST00000580446 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 ZNF316A6NFI3 1004 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 SMARCA5O60264 1052 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 PPFIA1Q13136 1202 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 PAK2Q13177 524 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 RSPH3Q86UC2 560 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 GPR152Q8TDT2 470 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 ACSF2Q96CM8 615 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 NGRNQ9NPE2 291 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 TUBE1Q9UJT0 475 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 PNMA2Q9UL42 364 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 COL4A3Q01955 1670 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 IGF2RP11717 2491 aa16.39■□□□□ 0.21
CSNK1D-213ENST00000580446 OPLAHO14841 1288 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 FOXP2O15409 715 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 N4BP1O75113 896 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 PDE4AP27815 886 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 SARSP49591 514 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 CSTF1Q05048 431 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 SPEM2Q0P670 501 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 PGM5Q15124 567 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 GRIK4Q16099 956 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 QRICH1Q2TAL8 776 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 MARCH8Q5T0T0 291 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 TAF2Q6P1X5 1199 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 MCF2L2Q86YR7 1114 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 FTSJ3Q8IY81 847 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 KBTBD3Q8NAB2 608 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 USP26Q9BXU7 913 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 VAT1LQ9HCJ6 419 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 PUF60Q9UHX1 559 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 ZNF215Q9UL58 517 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 ASPMQ8IZT6 3477 aa16.38■□□□□ 0.21
CSNK1D-213ENST00000580446 NFX1Q12986 1120 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 TSSK4Q6SA08 328 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 LRRC55Q6ZSA7 311 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 CCDC149Q6ZUS6 474 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 OTOP3Q7RTS5 596 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 VSIG10LQ86VR7 867 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 MRPL43Q8N983 215 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 FTHL17Q9BXU8 183 aa16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 SPATA6Q9NWH7 488 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-213ENST00000580446 WNT16Q9UBV4 365 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms