RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 TMC5Q6UXY8 1006 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 NSMFQ6X4W1 530 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 C15orf39Q6ZRI6 1047 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 PPTC7Q8NI37 304 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 BBXQ8WY36 941 aaPredicted RBP7.24□□□□□ -1.25
CCDC178-209ENST00000579947 NEUROD6Q96NK8 337 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 USP26Q9BXU7 913 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 SRPK3Q9UPE1 567 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 KIAA1217Q5T5P2 1943 aa7.24□□□□□ -1.25
CCDC178-209ENST00000579947 TSC2P49815 1807 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 H0Y626 953 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 TRIM16O95361 564 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 WISP1O95388 367 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CHRNA1P02708 482 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 GHRP10912 638 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 FZD5Q13467 585 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 WDR43Q15061 677 aaKnown RBP eCLIP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 RTN4RL1Q86UN2 441 aaPredicted RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 FEZF2Q8TBJ5 459 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 STAMQ92783 540 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 FTHL17Q9BXU8 183 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 PCGF6Q9BYE7 350 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CWH43Q9H720 699 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 SNRKQ9NRH2 765 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 PCDHGA5Q9Y5G8 931 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 TEP1Q99973 2627 aaKnown RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 EPCAMP16422 314 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 TARSP26639 723 aaKnown RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 GBP2P32456 591 aaPredicted RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CDK8P49336 464 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CCR3P51677 355 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 SNW1Q13573 536 aaKnown RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 BAATQ14032 418 aaPredicted RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 SLC44A4Q53GD3 710 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CYP26C1Q6V0L0 522 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 FAM43BQ6ZT52 329 aaPredicted RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 TMC7Q7Z402 723 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CABP7Q86V35 215 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 FAM160B2Q86V87 743 aa7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CMASQ8NFW8 434 aaPredicted RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CCDC86Q9H6F5 360 aaKnown RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 DDX41Q9UJV9 622 aaKnown RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 PA2G4Q9UQ80 394 aaKnown RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 CNOT1A5YKK6 2376 aaKnown RBP7.23□□□□□ -1.25
CCDC178-209ENST00000579947 FAM205CA6NFA0 338 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 B4DLN1 442 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 MRPL12P52815 198 aaKnown RBP7.22□□□□□ -1.25
CCDC178-209ENST00000579947 TSHZ1Q6ZSZ6 1077 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 C16orf86Q6ZW13 317 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 LONP2Q86WA8 852 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 DNERQ8NFT8 737 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 ZNF512BQ96KM6 892 aaPredicted RBP7.22□□□□□ -1.25
CCDC178-209ENST00000579947 CRNKL1Q9BZJ0 848 aaKnown RBP7.22□□□□□ -1.25
CCDC178-209ENST00000579947 CHRDQ9H2X0 955 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 VPS45Q9NRW7 570 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 FAM217BQ9NTX9 383 aaPredicted RBP7.22□□□□□ -1.25
CCDC178-209ENST00000579947 CLUHO75153 1309 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 APAF1O14727 1248 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 SMIM10L2AP0DMW4 78 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 SMIM10L2BP0DMW5 78 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 SCG2P13521 617 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 PPM1AP35813 382 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 GMCL1P1Q8NEA9 526 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 EDEM2Q9BV94 578 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 WDR6Q9NNW5 1121 aaKnown RBP7.22□□□□□ -1.25
CCDC178-209ENST00000579947 RAXQ9Y2V3 346 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 SHROOM3Q8TF72 1996 aa7.22□□□□□ -1.25
CCDC178-209ENST00000579947 FANCIQ9NVI1 1328 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 CAPN9O14815 690 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 AXIN1O15169 862 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 PLA2G6O60733 806 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 PDE4AP27815 886 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 ATP8B2P98198 1209 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 KRT17Q04695 432 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 LAMC2Q13753 1193 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 LY6KQ17RY6 165 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 FBXO47Q5MNV8 452 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 LRFN2Q9ULH4 789 aa7.21□□□□□ -1.25
CCDC178-209ENST00000579947 C4orf47A7E2U8 309 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 PAPSS2O95340 614 aaPredicted RBP7.21□□□□□ -1.26
CCDC178-209ENST00000579947 RAP1GAPP47736 663 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 PLCB2Q00722 1185 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 GIT2Q14161 759 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 PPFIBP1Q86W92 1011 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 DCP1AQ9NPI6 582 aaPredicted RBP7.21□□□□□ -1.26
CCDC178-209ENST00000579947 DKK4Q9UBT3 224 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 CHURC1-FNTBB4DL54 471 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 PPFIA4O75335 1185 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 GNAT1P11488 350 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 FNTBP49356 437 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 SARSP49591 514 aaKnown RBP7.21□□□□□ -1.26
CCDC178-209ENST00000579947 GPC5P78333 572 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 CFHR1Q03591 330 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 SRSF5Q13243 272 aaKnown RBP7.21□□□□□ -1.26
CCDC178-209ENST00000579947 COLEC12Q5KU26 742 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 CEP68Q76N32 757 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 ZNF687Q8N1G0 1237 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 STAG1Q8WVM7 1258 aa7.21□□□□□ -1.26
CCDC178-209ENST00000579947 MKL1Q969V6 931 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms