RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 POLR2MP0CAP2 368 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CA8P35219 290 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MRPS9P82933 396 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 NFX1Q12986 1120 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 SEMA3FQ13275 785 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 RSPO4Q2I0M5 234 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 RARS2Q5T160 578 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 IER5Q5VY09 327 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 KANK3Q6NY19 840 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 DGKHQ86XP1 1220 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TBC1D10CQ8IV04 446 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 C12orf76Q8N812 135 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 RASGRP4Q8TDF6 673 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 OTUD7AQ8TE49 926 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CASP10Q92851 521 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 NECTIN4Q96NY8 510 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 DBR1Q9UK59 544 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 NCOR2Q9Y618 2525 aa15.26■□□□□ 0.03
CDK5RAP3-213ENST00000579605 DMXL1Q9Y485 3027 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TCF7P36402 384 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MTHFRP42898 656 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 SARSP49591 514 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MARCH8Q5T0T0 291 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 C20orf194Q5TEA3 1177 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TMC7Q7Z402 723 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 SIX5Q8N196 739 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MRPS27Q92552 414 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ESR2Q92731 530 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 RTP3Q9BQQ7 232 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TMX1Q9H3N1 280 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 SEMA4AQ9H3S1 761 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ERVK-5Q9HDB9 667 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 DLL3Q9NYJ7 618 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MAP3K20Q9NYL2 800 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TRPV2Q9Y5S1 764 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 WDR87Q6ZQQ6 2873 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CACNA1GO43497 2377 aa15.25■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 EP300Q09472 2414 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 EPG5Q9HCE0 2579 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 M0QZ92 97 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 FIBPO43427 364 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 GHRHRQ02643 423 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ITIH3Q06033 890 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 HOMER1Q86YM7 354 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ZDHHC14Q8IZN3 488 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 STAG2Q8N3U4 1231 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 GLG1Q92896 1179 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 NGRNQ9NPE2 291 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 HCFC2Q9Y5Z7 792 aa15.24■□□□□ 0.03
CDK5RAP3-213ENST00000579605 NEDD4P46934 1319 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 PLXNA4Q9HCM2 1894 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MBLAC1A4D2B0 266 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MGEA5O60502 916 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 FGFR1P11362 822 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 PBX3P40426 434 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ST3GAL2Q16842 350 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 RUBCNQ92622 972 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 FAM227BQ96M60 508 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 INPP4AQ96PE3 977 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CWH43Q9H720 699 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 HELLSQ9NRZ9 838 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 GINS2Q9Y248 185 aa15.23■□□□□ 0.03
CDK5RAP3-213ENST00000579605 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 DENND3A2RUS2 1198 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 LAG3P18627 525 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 RFX1P22670 979 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 PLCB3Q01970 1234 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ATAT1Q5SQI0 421 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 IQCA1Q86XH1 822 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ADAM2Q99965 735 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CELF4Q9BZC1 486 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 RNF41Q9H4P4 317 aaPredicted RBP15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CYP26B1Q9NR63 512 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ERAP1Q9NZ08 941 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 SQORQ9Y6N5 450 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ZNF292O60281 2723 aa15.22■□□□□ 0.03
CDK5RAP3-213ENST00000579605 IGSF9BQ9UPX0 1349 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 GSTTP1A0A1W2PQM5 241 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 KLRF2D3W0D1 207 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ZBTB5O15062 677 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CLASP2O75122 1294 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 EOMESO95936 686 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 INSRRP14616 1297 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 KRT17Q04695 432 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TDGQ13569 410 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MCMDC2Q4G0Z9 681 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 CCDC178Q5BJE1 867 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 SPECC1Q5M775 1068 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 SAMD3Q8N6K7 520 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 TRAPPC12Q8WVT3 735 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ZSCAN10Q96SZ4 725 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 ATP6V0A4Q9HBG4 840 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 PKD2L1Q9P0L9 805 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
CDK5RAP3-213ENST00000579605 KMT2BQ9UMN6 2715 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 A0A0D9SFI3 127 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms