RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CTAGE5O15320 804 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SLITRK3O94933 977 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 F2P00734 622 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ZNF286BP0CG31 522 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PSEN2P49810 448 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ACLYP53396 1101 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CYP4A11Q02928 519 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 MFSD10Q14728 455 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 XKR3Q5GH77 459 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCDC73Q6ZRK6 1079 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 C4orf19Q8IY42 314 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 EXOC8Q8IYI6 725 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 MRPS27Q92552 414 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 HSD17B14Q9BPX1 270 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCSER1Q9C0I3 900 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 TUT1Q9H6E5 874 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 STARD7Q9NQZ5 370 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PHF24Q9UPV7 400 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 DNM3Q9UQ16 869 aa12.61□□□□□ -0.39
CDK5RAP3-210ENST00000578733 COL1A2P08123 1366 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 HBP1O60381 514 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 LYPLA2O95372 231 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 OATP04181 439 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 GNAT1P11488 350 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PTGS1P23219 599 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CMA1P23946 247 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CHMP4BP1P59074 171 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PRKCEQ02156 737 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 GRIN1Q05586 938 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CTTNQ14247 550 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 KIAA0753Q2KHM9 967 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 RRAGBQ5VZM2 374 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 RESP18Q5W5W9 173 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CATSPER3Q86XQ3 398 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 C7orf31Q8N865 590 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ATP8B4Q8TF62 1192 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CHAMP1Q96JM3 812 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 C16orf70Q9BSU1 422 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SEPT9Q9UHD8 586 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 KIAA1024Q9UPX6 916 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PPME1Q9Y570 386 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 NR2E3Q9Y5X4 410 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 MROH7Q68CQ1 1323 aa12.6□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A0U1RQG5 324 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A1W2PQ45 241 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A1W2PQY0 241 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PP2D1A8MPX8 630 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 MED24O75448 989 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CDC25AP30304 524 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 YWHABP31946 246 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 STAT6P42226 847 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 UBE2HP62256 183 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PTPN11Q06124 597 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ZNF484Q5JVG2 852 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 HYIQ5T013 277 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 AXDND1Q5T1B0 1012 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 SHC4Q6S5L8 630 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 TRIM50Q86XT4 487 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 IQUBQ8NA54 791 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 EPSTI1Q96J88 318 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 JPH2Q9BR39 696 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ANKEF1Q9NU02 776 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 DDX19AQ9NUU7 478 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 A0A0C4DFX4 3053 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 COL6A3P12111 3177 aa12.59□□□□□ -0.39
CDK5RAP3-210ENST00000578733 ARHGEF35A5YM69 484 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 RRN3P2A6NIE6 340 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PRPF40AO75400 957 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SPATA31C1P0DKV0 1188 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MARK3P27448 753 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PPFIA1Q13136 1202 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 FAM47CQ5HY64 1035 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 SPECC1Q5M775 1068 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 NFRKBQ6P4R8 1299 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 NECAB2Q7Z6G3 386 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 CEP57L1Q8IYX8 460 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 FSIP1Q8NA03 581 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PCYT2Q99447 389 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 PRO3102Q9H379 93 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 C11orf49Q9H6J7 331 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 MAGEF1Q9HAY2 307 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 STK17AQ9UEE5 414 aa12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 DBR1Q9UK59 544 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-210ENST00000578733 TELO2Q9Y4R8 837 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms