RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 LRRC41Q15345 812 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 NFIL3Q16649 462 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 BMT2Q1RMZ1 405 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 C1orf186Q6ZWK4 172 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 HS2ST1Q7LGA3 356 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 FRMD5Q7Z6J6 570 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
SKA2-204ENST00000578519 VSIG10LQ86VR7 867 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 C4orf19Q8IY42 314 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 CCDC170Q8IYT3 715 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 REPS2Q8NFH8 660 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 NEK11Q8NG66 645 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 ZNF592Q92610 1267 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 UIMC1Q96RL1 719 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 REEP2Q9BRK0 252 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 LXNQ9BS40 222 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 TUBB2BQ9BVA1 445 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 ABHD10Q9NUJ1 306 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 PCDHA2Q9Y5H9 948 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.28□□□□□ -0.44
SKA2-204ENST00000578519 SNCAIPQ9Y6H5 919 aa12.28□□□□□ -0.44
SKA2-204ENST00000578519 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.44
SKA2-204ENST00000578519 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
SKA2-204ENST00000578519 SLC16A3O15427 465 aaKnown RBP12.27□□□□□ -0.45
SKA2-204ENST00000578519 GCNT3O95395 438 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 GYPCP04921 128 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 PSAPP07602 524 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 EPB41P11171 864 aaKnown RBP12.27□□□□□ -0.45
SKA2-204ENST00000578519 EPHX2P34913 555 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 ETF1P62495 437 aaKnown RBP12.27□□□□□ -0.45
SKA2-204ENST00000578519 PRKG1Q13976 671 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 VGLL4Q14135 290 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 MYBPC2Q14324 1141 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 SYCP1Q15431 976 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 STXBP2Q15833 593 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 ZCWPW2Q504Y3 356 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 GADL1Q6ZQY3 521 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 SFR1Q86XK3 245 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 FMNL3Q8IVF7 1028 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 FAM178BQ8IXR5 827 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 ANKRD35Q8N283 1001 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 PIGOQ8TEQ8 1089 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 ATP6V0A1Q93050 837 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 HPS3Q969F9 1004 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 DRC1Q96MC2 740 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 TMEM206Q9H813 350 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 TBC1D7Q9P0N9 293 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 ZNF214Q9UL59 606 aaPredicted RBP12.27□□□□□ -0.45
SKA2-204ENST00000578519 PCDHA10Q9Y5I2 948 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 NFASCO94856 1347 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 PHLPP2Q6ZVD8 1323 aa12.27□□□□□ -0.45
SKA2-204ENST00000578519 NPHP3-ACAD11A0A0J9YXS1 232 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 DDX39AO00148 427 aaKnown RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 KIF5CO60282 957 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 SCP2P22307 547 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 GTF2F1P35269 517 aaKnown RBP eCLIP12.26□□□□□ -0.451e-8■■■■■ 31.9
SKA2-204ENST00000578519 MRPS9P82933 396 aaKnown RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 CDK17Q00537 523 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 RAD51AP2Q09MP3 1159 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 PPIL2Q13356 520 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 TMEM132BQ14DG7 1078 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 SLC30A10Q6XR72 485 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 LBX2Q6XYB7 198 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 EPM2AIP1Q7L775 607 aaPredicted RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 CACNA2D4Q7Z3S7 1137 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 MTERF4Q7Z6M4 381 aaKnown RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 RIOX2Q8IUF8 465 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 TMEM139Q8IV31 216 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 NELFCDQ8IXH7 590 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 ZC3H3Q8IXZ2 948 aaKnown RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 SCFD1Q8WVM8 642 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 DNAJC7Q99615 494 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 MOV10L1Q9BXT6 1211 aaKnown RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 KCTD10Q9H3F6 313 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 MMRN2Q9H8L6 949 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 LUC7LQ9NQ29 371 aaKnown RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 CYP39A1Q9NYL5 469 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 COL20A1Q9P218 1284 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 MYO1AQ9UBC5 1043 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 ARMCX3Q9UH62 379 aaPredicted RBP12.26□□□□□ -0.45
SKA2-204ENST00000578519 EXOC7Q9UPT5 735 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 DAAM1Q9Y4D1 1078 aa12.26□□□□□ -0.45
SKA2-204ENST00000578519 TTC26A0AVF1 554 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 H0YCG3 227 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 DHX15O43143 795 aaKnown RBP12.25□□□□□ -0.45
SKA2-204ENST00000578519 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
SKA2-204ENST00000578519 NR2F2P24468 414 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 CASQ1P31415 396 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 FXR1P51114 621 aaKnown RBP eCLIP12.25□□□□□ -0.45
SKA2-204ENST00000578519 ZNF131P52739 623 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 SMTNP53814 917 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 TUBB4BP68371 445 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 GPR162Q16538 588 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 ARHGAP29Q52LW3 1261 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 ODR4Q5SWX8 454 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 MIS18BP1Q6P0N0 1132 aa12.25□□□□□ -0.45
SKA2-204ENST00000578519 KCNV1Q6PIU1 500 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms