RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 MEIS1O00470 390 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 CHMP2AO43633 222 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 SORBS3O60504 671 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 CSF2RAP15509 400 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 PLCG1P19174 1290 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 CASP1P29466 404 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 COPB2P35606 906 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 TXLNAP40222 546 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 UBA7P41226 1012 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 AFMP43652 599 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 ALDH5A1P51649 535 aaPredicted RBP11.29□□□□□ -0.6
CRLF3-202ENST00000577725 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 GRB10Q13322 594 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 PNOCQ13519 176 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 E2F4Q16254 413 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 HFE2Q6ZVN8 426 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 SLFN12Q8IYM2 578 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 TMEM199Q8N511 208 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 SHCBP1Q8NEM2 672 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 PRSS33Q8NF86 280 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 NSUN6Q8TEA1 469 aaKnown RBP11.29□□□□□ -0.6
CRLF3-202ENST00000577725 SNX29Q8TEQ0 813 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 STAMQ92783 540 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 SLC5A5Q92911 643 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 FGD4Q96M96 766 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 ZNF577Q9BSK1 485 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 JADE2Q9NQC1 790 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
CRLF3-202ENST00000577725 EML1O00423 815 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 TBX3O15119 743 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 IGHA2P01877 340 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 ACRP10323 421 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 STAT6P42226 847 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 CCNA1P78396 465 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
CRLF3-202ENST00000577725 SPIRE1Q08AE8 756 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 ITGB3BPQ13352 177 aaPredicted RBP11.28□□□□□ -0.6
CRLF3-202ENST00000577725 KCTD2Q14681 263 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 ECM1Q16610 540 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 RRAGBQ5VZM2 374 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 LRSAM1Q6UWE0 723 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 VSIG10LQ86VR7 867 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 FAM133AQ8N9E0 248 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 AK8Q96MA6 479 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 FAM20AQ96MK3 541 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 TIGD1Q96MW7 591 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 PRRX2Q99811 253 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 CCSER1Q9C0I3 900 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 UNC45AQ9H3U1 944 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 TSPY26PQ9H489 355 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 MROH8Q9H579 483 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 AGO4Q9HCK5 861 aaKnown RBP11.28□□□□□ -0.6
CRLF3-202ENST00000577725 DISC1Q9NRI5 854 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
CRLF3-202ENST00000577725 A0A1W2PQ45 241 aaPredicted RBP11.27□□□□□ -0.61
CRLF3-202ENST00000577725 A0A1W2PQY0 241 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 RFXAPO00287 272 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 BIN1O00499 593 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 CTAGE5O15320 804 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 GAS7O60861 476 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 COBLO75128 1261 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 PSMD10O75832 226 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 RGS20O76081 388 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.61
CRLF3-202ENST00000577725 FCER1AP12319 257 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
CRLF3-202ENST00000577725 TYRO3Q06418 890 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 MTMR1Q13613 665 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.61
CRLF3-202ENST00000577725 GSE1Q14687 1217 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 NAALADL2Q58DX5 795 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 ISM2Q6H9L7 571 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 RBM43Q6ZSC3 357 aaKnown RBP11.27□□□□□ -0.61
CRLF3-202ENST00000577725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
CRLF3-202ENST00000577725 EEPD1Q7L9B9 569 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 NIPA1Q7RTP0 329 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 KCNK18Q7Z418 384 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 CEP57L1Q8IYX8 460 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 PAGE5Q96GU1 130 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 FUCA2Q9BTY2 467 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 TEKT3Q9BXF9 490 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 RAB34Q9BZG1 259 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 BCAS3Q9H6U6 928 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 KCNH7Q9NS40 1196 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 CCDC39Q9UFE4 941 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 PCDHA11Q9Y5I1 949 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 IVNS1ABPQ9Y6Y0 642 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 ZDBF2Q9HCK1 2354 aa11.27□□□□□ -0.61
CRLF3-202ENST00000577725 DNAJC25-GNG10A0A024R161 153 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 IPO5O00410 1097 aaKnown RBP11.26□□□□□ -0.61
CRLF3-202ENST00000577725 ATP9AO75110 1047 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 MED24O75448 989 aa11.26□□□□□ -0.61
CRLF3-202ENST00000577725 SLFN14P0C7P3 912 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms