RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 SEPT9Q9UHD8 586 aaPredicted RBP18.39■□□□□ 0.53
ERCC4-208ENST00000576348 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
ERCC4-208ENST00000576348 TELO2Q9Y4R8 837 aa18.39■□□□□ 0.53
ERCC4-208ENST00000576348 ZSWIM8A7E2V4 1837 aa18.39■□□□□ 0.53
ERCC4-208ENST00000576348 MGAMO43451 1857 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 SYCE3A1L190 88 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 FOXN1O15353 648 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 DUSP11O75319 330 aaKnown RBP18.38■□□□□ 0.53
ERCC4-208ENST00000576348 MYL1P05976 194 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 MMP3P08254 477 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 HSPA8P11142 646 aaKnown RBP18.38■□□□□ 0.53
ERCC4-208ENST00000576348 PTGS1P23219 599 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 ASIC1P78348 528 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 XKR9Q5GH70 373 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 XKR3Q5GH77 459 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 SASS6Q6UVJ0 657 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 BLZF1Q9H2G9 400 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 ANKEF1Q9NU02 776 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 KBTBD4Q9NVX7 518 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 WRAP73Q9P2S5 460 aaPredicted RBP18.38■□□□□ 0.53
ERCC4-208ENST00000576348 DBR1Q9UK59 544 aaKnown RBP18.38■□□□□ 0.53
ERCC4-208ENST00000576348 GNEQ9Y223 722 aaKnown RBP18.38■□□□□ 0.53
ERCC4-208ENST00000576348 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 IGSF9BQ9UPX0 1349 aa18.38■□□□□ 0.53
ERCC4-208ENST00000576348 ADCY6O43306 1168 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 PPFIA4O75335 1185 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 LGR5O75473 907 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 OATP04181 439 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 PRR29P0C7W0 189 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 HSPA1AP0DMV8 641 aaKnown RBP18.37■□□□□ 0.53
ERCC4-208ENST00000576348 HSPA1BP0DMV9 641 aaKnown RBP18.37■□□□□ 0.53
ERCC4-208ENST00000576348 XRCC6P12956 609 aaKnown RBP eCLIP18.37■□□□□ 0.53
ERCC4-208ENST00000576348 MARK3P27448 753 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 CCND3P30281 292 aaPredicted RBP18.37■□□□□ 0.53
ERCC4-208ENST00000576348 SLC26A2P50443 739 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 PLPPR4Q7Z2D5 763 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 SYT2Q8N9I0 419 aaPredicted RBP18.37■□□□□ 0.53
ERCC4-208ENST00000576348 AFAP1L1Q8TED9 768 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 LRRC15Q8TF66 581 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 HMX1Q9NP08 348 aaPredicted RBP18.37■□□□□ 0.53
ERCC4-208ENST00000576348 RMND1Q9NWS8 449 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 MAFBQ9Y5Q3 323 aaPredicted RBP18.37■□□□□ 0.53
ERCC4-208ENST00000576348 EMSYQ7Z589 1322 aa18.37■□□□□ 0.53
ERCC4-208ENST00000576348 IGKV6D-21A0A0A0MT36 114 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 ZEB2O60315 1214 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
ERCC4-208ENST00000576348 LGALS2P05162 132 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 MYL3P08590 195 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 LBX1P52954 281 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 FSCN1Q16658 493 aaKnown RBP18.36■□□□□ 0.53
ERCC4-208ENST00000576348 SLC9C1Q4G0N8 1177 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 SH3RF1Q7Z6J0 888 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 CTU1Q7Z7A3 348 aaKnown RBP18.36■□□□□ 0.53
ERCC4-208ENST00000576348 TRIM50Q86XT4 487 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 ERCC4Q92889 916 aaPredicted RBP18.36■□□□□ 0.53
ERCC4-208ENST00000576348 CEP170P1Q96L14 293 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 C7orf25Q9BPX7 421 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 XPNPEP3Q9NQH7 507 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 ERAP1Q9NZ08 941 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 KIAA1468Q9P260 1216 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 TRPC6Q9Y210 931 aa18.36■□□□□ 0.53
ERCC4-208ENST00000576348 A6NJR5 290 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 ZNF862O60290 1169 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 MSCO60682 206 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 TBCAO75347 108 aaKnown RBP18.35■□□□□ 0.53
ERCC4-208ENST00000576348 C6orf222P0C671 652 aaPredicted RBP18.35■□□□□ 0.53
ERCC4-208ENST00000576348 ZNF286BP0CG31 522 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 IDEP14735 1019 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 SLC12A3P55017 1021 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 CHMP4BP1P59074 171 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 CUL4BQ13620 913 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 MAP3K21Q5TCX8 1036 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 PLA2G4FQ68DD2 849 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 PADI6Q6TGC4 694 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 DYMQ7RTS9 669 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 ATP8B4Q8TF62 1192 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 PCYT2Q99447 389 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 TRIM9Q9C026 710 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 ZHX3Q9H4I2 956 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 EXOC1Q9NV70 894 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
ERCC4-208ENST00000576348 PCDHA5Q9Y5H7 936 aa18.35■□□□□ 0.53
ERCC4-208ENST00000576348 MYMKA6NI61 221 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 BIN1O00499 593 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 ZBTB39O15060 712 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 KPNA6O60684 536 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 USO1O60763 962 aaKnown RBP18.34■□□□□ 0.53
ERCC4-208ENST00000576348 RPN1P04843 607 aaKnown RBP18.34■□□□□ 0.53
ERCC4-208ENST00000576348 CCDC192P0DO97 292 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 CYP11B2P19099 503 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 CASP1P29466 404 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 RARRES1P49788 294 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
ERCC4-208ENST00000576348 BEX3Q00994 111 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 DPYDQ12882 1025 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 MTERF2Q49AM1 385 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 RBM43Q6ZSC3 357 aaKnown RBP18.34■□□□□ 0.53
ERCC4-208ENST00000576348 SH3TC2Q8TF17 1288 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 BBXQ8WY36 941 aaPredicted RBP18.34■□□□□ 0.53
ERCC4-208ENST00000576348 DDX12PQ92771 950 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms