RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 RSPH3Q86UC2 560 aa23.35■■□□□ 1.33
HCFC1R1-208ENST00000575214 RDM1Q8NG50 284 aa23.35■■□□□ 1.33
HCFC1R1-208ENST00000575214 ZBTB10Q96DT7 871 aa23.35■■□□□ 1.33
HCFC1R1-208ENST00000575214 FOXP1Q9H334 677 aaPredicted RBP23.35■■□□□ 1.33
HCFC1R1-208ENST00000575214 SCN5AQ14524 2016 aa23.35■■□□□ 1.33
HCFC1R1-208ENST00000575214 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.34■■□□□ 1.33
HCFC1R1-208ENST00000575214 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.34■■□□□ 1.33
HCFC1R1-208ENST00000575214 TBX3O15119 743 aa23.34■■□□□ 1.33
HCFC1R1-208ENST00000575214 BAG4O95429 457 aaKnown RBP23.34■■□□□ 1.33
HCFC1R1-208ENST00000575214 ATP4AP20648 1035 aa23.34■■□□□ 1.33
HCFC1R1-208ENST00000575214 SMAD3P84022 425 aaKnown RBP23.34■■□□□ 1.33
HCFC1R1-208ENST00000575214 BBXQ8WY36 941 aaPredicted RBP23.34■■□□□ 1.33
HCFC1R1-208ENST00000575214 CXCL10P02778 98 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 ATP2B1P20020 1258 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 GJB2P29033 226 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 MBTPS1Q14703 1052 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 B3GNT9Q6UX72 402 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 DNAJB3Q8WWF6 145 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 HAS1Q92839 578 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 FAM167AQ96KS9 214 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 FAM49AQ9H0Q0 323 aaPredicted RBP23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 SLC4A7Q9Y6M7 1214 aa23.33■■□□□ 1.33
HCFC1R1-208ENST00000575214 COL1A2P08123 1366 aa23.33■■□□□ 1.32
HCFC1R1-208ENST00000575214 KAT6AQ92794 2004 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 WNT7AO00755 349 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 NEMFO60524 1076 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 PRKCEQ02156 737 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 PPP2R5CQ13362 524 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 UGCGQ16739 394 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 ZNF484Q5JVG2 852 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 FAM109BQ6ICB4 259 aaPredicted RBP23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 GPR153Q6NV75 609 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 CNKSR3Q6P9H4 555 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 RPAINQ86UA6 219 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 SLFN12Q8IYM2 578 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 VAV3Q9UKW4 847 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 SMC3Q9UQE7 1217 aa23.32■■□□□ 1.32
HCFC1R1-208ENST00000575214 ZNF862O60290 1169 aa23.31■■□□□ 1.32
HCFC1R1-208ENST00000575214 OATP04181 439 aa23.31■■□□□ 1.32
HCFC1R1-208ENST00000575214 CALCRLQ16602 461 aa23.31■■□□□ 1.32
HCFC1R1-208ENST00000575214 MTHFD1LQ6UB35 978 aa23.31■■□□□ 1.32
HCFC1R1-208ENST00000575214 NOSTRINQ8IVI9 506 aa23.31■■□□□ 1.32
HCFC1R1-208ENST00000575214 PCDHA2Q9Y5H9 948 aa23.31■■□□□ 1.32
HCFC1R1-208ENST00000575214 GRXCR1A8MXD5 290 aa23.3■■□□□ 1.32
HCFC1R1-208ENST00000575214 RPLP2P05387 115 aaKnown RBP23.3■■□□□ 1.32
HCFC1R1-208ENST00000575214 KLRC1P26715 233 aa23.3■■□□□ 1.32
HCFC1R1-208ENST00000575214 NRBP2Q9NSY0 501 aa23.3■■□□□ 1.32
HCFC1R1-208ENST00000575214 CEP131Q9UPN4 1083 aa23.3■■□□□ 1.32
HCFC1R1-208ENST00000575214 ZBTB42B2RXF5 422 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 KIF28PB7ZC32 967 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 RBAK-RBAKDNI3L0D1 243 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 EML1O00423 815 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 BAIAP3O94812 1187 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 MCM7P33993 719 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 FAM26DQ5JW98 314 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 NCAPH2Q6IBW4 605 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 BANK1Q8NDB2 785 aa23.29■■□□□ 1.32
HCFC1R1-208ENST00000575214 SMIM35A0A1B0GVV1 85 aa23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 H3BQV1 296 aa23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 CHRNA1P02708 482 aa23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 ATP2A2P16615 1042 aaKnown RBP23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 KCNJ6P48051 423 aa23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 MCTP1Q6DN14 999 aa23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 NOL7Q9UMY1 257 aaKnown RBP23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 CDY2AQ9Y6F7 541 aa23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 TET1Q8NFU7 2136 aa23.28■■□□□ 1.32
HCFC1R1-208ENST00000575214 M0QZ92 97 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 DNAJB2P25686 324 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 U2AF2P26368 475 aaKnown RBP eCLIP23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 MRPS6P82932 125 aaKnown RBP23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 MGAT3Q09327 533 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 IKBKEQ14164 716 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 TCTN1Q2MV58 587 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 ZNF697Q5TEC3 545 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 IER5Q5VY09 327 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 Q7L0L9 218 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 DEFB123Q8N688 67 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 DBF4BQ8NFT6 615 aa23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 SEPT9Q9UHD8 586 aaPredicted RBP23.27■■□□□ 1.32
HCFC1R1-208ENST00000575214 C22orf31O95567 290 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 GHRP10912 638 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 TXKP42681 527 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 PSMC5P62195 406 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 TMEM62Q0P6H9 643 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 ZNF174Q15697 407 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 PLEKHG4Q58EX7 1191 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 TTC38Q5R3I4 469 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 METTL13Q8N6R0 699 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 SEPT8Q92599 483 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 SLC9A7Q96T83 725 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 PBX4Q9BYU1 374 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 OSBPL7Q9BZF2 842 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 PCDHA12Q9UN75 941 aa23.27■■□□□ 1.31
HCFC1R1-208ENST00000575214 LAMA2P24043 3122 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 MYH9P35579 1960 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 ABHD14A-ACY1A0A1B0GW23 586 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 P4HBP07237 508 aaKnown RBP23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 PBX2P40425 430 aa23.26■■□□□ 1.31
HCFC1R1-208ENST00000575214 TRAPPC10P48553 1259 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms