RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 FDPSP14324 419 aaKnown RBP22.32■■□□□ 1.16
SCARF1-208ENST00000574545 KRT76Q01546 638 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 Q4G0T1 1027 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 FAM160B1Q5W0V3 765 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 SPRED2Q7Z698 418 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 RSPH3Q86UC2 560 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.32■■□□□ 1.16
SCARF1-208ENST00000574545 SMAP1Q8IYB5 467 aaPredicted RBP22.32■■□□□ 1.16
SCARF1-208ENST00000574545 SLC5A5Q92911 643 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 KCNJ14Q9UNX9 436 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 PCDHA10Q9Y5I2 948 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 TRANK1O15050 2925 aa22.32■■□□□ 1.16
SCARF1-208ENST00000574545 SIP14410 1827 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 EPOPA6NHQ4 379 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 ZBTB42B2RXF5 422 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 BACH1O14867 736 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 LPIN1Q14693 890 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 FBXO47Q5MNV8 452 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 MTHFD1LQ6UB35 978 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 APBB2Q92870 758 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 TOP1MTQ969P6 601 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 RIT2Q99578 217 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 IFIH1Q9BYX4 1025 aaKnown RBP22.31■■□□□ 1.16
SCARF1-208ENST00000574545 GJB4Q9NTQ9 266 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 CDY2AQ9Y6F7 541 aa22.31■■□□□ 1.16
SCARF1-208ENST00000574545 SMIM35A0A1B0GVV1 85 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 RPLP2P05387 115 aaKnown RBP22.3■■□□□ 1.16
SCARF1-208ENST00000574545 POU3F3P20264 500 aaPredicted RBP22.3■■□□□ 1.16
SCARF1-208ENST00000574545 MRPS6P82932 125 aaKnown RBP22.3■■□□□ 1.16
SCARF1-208ENST00000574545 HTRA4P83105 476 aaPredicted RBP22.3■■□□□ 1.16
SCARF1-208ENST00000574545 PDXDC2PQ6P474 469 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 MOXD1Q6UVY6 613 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 B3GNT9Q6UX72 402 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 NECAB1Q8N987 351 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 GTF3C6Q969F1 213 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 ZBED2Q9BTP6 218 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 CERS4Q9HA82 394 aa22.3■■□□□ 1.16
SCARF1-208ENST00000574545 COL1A2P08123 1366 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 RFXAPO00287 272 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 PSMD10O75832 226 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 TDP2O95551 362 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 AMHP03971 560 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 GHRP10912 638 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 KLRC1P26715 233 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 NEK4P51957 841 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 ZNF484Q5JVG2 852 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 GJA10Q969M2 543 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 FAM49AQ9H0Q0 323 aaPredicted RBP22.29■■□□□ 1.16
SCARF1-208ENST00000574545 SQORQ9Y6N5 450 aa22.29■■□□□ 1.16
SCARF1-208ENST00000574545 PSAPP07602 524 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 NONOQ15233 471 aaKnown RBP eCLIP22.28■■□□□ 1.16
SCARF1-208ENST00000574545 C8orf34Q49A92 452 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 FAM117BQ6P1L5 589 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 KRT25Q7Z3Z0 450 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 MYOCDQ8IZQ8 938 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 NME8Q8N427 588 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 SP7Q8TDD2 431 aaPredicted RBP22.28■■□□□ 1.16
SCARF1-208ENST00000574545 BBXQ8WY36 941 aaPredicted RBP22.28■■□□□ 1.16
SCARF1-208ENST00000574545 AGO3Q9H9G7 860 aaKnown RBP22.28■■□□□ 1.16
SCARF1-208ENST00000574545 DISC1Q9NRI5 854 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 ORC3Q9UBD5 711 aaPredicted RBP22.28■■□□□ 1.16
SCARF1-208ENST00000574545 GABBR1Q9UBS5 961 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 IGSF9BQ9UPX0 1349 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 KDM3AQ9Y4C1 1321 aa22.28■■□□□ 1.16
SCARF1-208ENST00000574545 PRRC2BQ5JSZ5 2229 aaKnown RBP22.27■■□□□ 1.16
SCARF1-208ENST00000574545 LINC01553A4QN01 128 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 WDR64B1ANS9 1081 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 IGFBP4P22692 258 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 ST3GAL1Q11201 340 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 INF2Q27J81 1249 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 IER5Q5VY09 327 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 KIAA0319LQ8IZA0 1049 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 NSUN7Q8NE18 718 aaKnown RBP22.27■■□□□ 1.16
SCARF1-208ENST00000574545 ETNPPLQ8TBG4 499 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 OXER1Q8TDS5 423 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 ARNTL2Q8WYA1 636 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 UNC45AQ9H3U1 944 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 INSL6Q9Y581 213 aa22.27■■□□□ 1.16
SCARF1-208ENST00000574545 MYH9P35579 1960 aaKnown RBP22.27■■□□□ 1.15
SCARF1-208ENST00000574545 CUL9Q8IWT3 2517 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 WDR81Q562E7 1941 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 ENPP3O14638 875 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 ZNF862O60290 1169 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 LPXNO60711 386 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 ERVK-21P61565 698 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 TMEM62Q0P6H9 643 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 TSHZ1Q6ZSZ6 1077 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 TEKT3Q9BXF9 490 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 CELF4Q9BZC1 486 aaKnown RBP22.26■■□□□ 1.15
SCARF1-208ENST00000574545 TRPV2Q9Y5S1 764 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 MTCH2Q9Y6C9 303 aa22.26■■□□□ 1.15
SCARF1-208ENST00000574545 GAS7O60861 476 aa22.25■■□□□ 1.15
SCARF1-208ENST00000574545 C22orf31O95567 290 aa22.25■■□□□ 1.15
SCARF1-208ENST00000574545 XBP1P17861 261 aa22.25■■□□□ 1.15
SCARF1-208ENST00000574545 EARS2Q5JPH6 523 aaKnown RBP22.25■■□□□ 1.15
SCARF1-208ENST00000574545 LRCH2Q5VUJ6 765 aa22.25■■□□□ 1.15
SCARF1-208ENST00000574545 RTN4RL1Q86UN2 441 aaPredicted RBP22.25■■□□□ 1.15
SCARF1-208ENST00000574545 KIF2CQ99661 725 aa22.25■■□□□ 1.15
SCARF1-208ENST00000574545 REV3LO60673 3130 aa22.25■■□□□ 1.15
SCARF1-208ENST00000574545 EVPLQ92817 2033 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms