RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 YWHABP31946 246 aaKnown RBP26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 ZNF445P59923 1031 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 AMPD3Q01432 767 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 UTP14CQ5TAP6 766 aaKnown RBP26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 GPBP1Q86WP2 473 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 SMARCE1Q969G3 411 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 TRIM9Q9C026 710 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 MAFBQ9Y5Q3 323 aaPredicted RBP26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 GOLGA6L3A6NEY3 463 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 PRKCEQ02156 737 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 TRIM50Q86XT4 487 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 SYT2Q8N9I0 419 aaPredicted RBP26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 C7orf25Q9BPX7 421 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 TUBE1Q9UJT0 475 aa26.81■■□□□ 1.88
ATPAF1-213ENST00000574428 DYNC1LI2O43237 492 aaPredicted RBP26.8■■□□□ 1.88
ATPAF1-213ENST00000574428 SMC2O95347 1197 aa26.8■■□□□ 1.88
ATPAF1-213ENST00000574428 HMGCRP04035 888 aa26.8■■□□□ 1.88
ATPAF1-213ENST00000574428 PRKAR2AP13861 404 aaKnown RBP26.8■■□□□ 1.88
ATPAF1-213ENST00000574428 AKR1A1P14550 325 aa26.8■■□□□ 1.88
ATPAF1-213ENST00000574428 FAM160B1Q5W0V3 765 aa26.8■■□□□ 1.88
ATPAF1-213ENST00000574428 TLK2Q86UE8 772 aa26.8■■□□□ 1.88
ATPAF1-213ENST00000574428 DKC1O60832 514 aaKnown RBP eCLIP26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 CNGA1P29973 690 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 STAT5BP51692 787 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 PRMT2P55345 433 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 PLA2G4FQ68DD2 849 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 ISM2Q6H9L7 571 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 SASS6Q6UVJ0 657 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 ANO5Q75V66 913 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 DYMQ7RTS9 669 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 PXYLP1Q8TE99 480 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 SH2D3AQ9BRG2 576 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 AZI2Q9H6S1 392 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 LGR5O75473 907 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 STBD1O95210 358 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 MYL1P05976 194 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 CYP11B2P19099 503 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 ATP4AP20648 1035 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 ASIC1P78348 528 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 ARSHQ5FYA8 562 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 LRSAM1Q6UWE0 723 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 SPATA20Q8TB22 786 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 AFAP1L1Q8TED9 768 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 DDX12PQ92771 950 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 GLG1Q92896 1179 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 FUCA2Q9BTY2 467 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 RUSC1Q9BVN2 902 aa26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 DBR1Q9UK59 544 aaKnown RBP26.79■■□□□ 1.88
ATPAF1-213ENST00000574428 HTTP42858 3142 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 NPHP3-ACAD11A0A0J9YXS1 232 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 ARHGEF35A5YM69 484 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 SARSP49591 514 aaKnown RBP26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 TYRO3Q06418 890 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 RAD51AP2Q09MP3 1159 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 NT5DC1Q5TFE4 455 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 LRRC27Q9C0I9 530 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 MAN1B1Q9UKM7 699 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 PTCH2Q9Y6C5 1203 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 EMSYQ7Z589 1322 aa26.78■■□□□ 1.88
ATPAF1-213ENST00000574428 RPN1P04843 607 aaKnown RBP26.77■■□□□ 1.88
ATPAF1-213ENST00000574428 MMP3P08254 477 aa26.77■■□□□ 1.88
ATPAF1-213ENST00000574428 CCND3P30281 292 aaPredicted RBP26.77■■□□□ 1.88
ATPAF1-213ENST00000574428 RARRES1P49788 294 aa26.77■■□□□ 1.88
ATPAF1-213ENST00000574428 CCDC43Q96MW1 224 aaKnown RBP26.77■■□□□ 1.88
ATPAF1-213ENST00000574428 SEPT9Q9UHD8 586 aaPredicted RBP26.77■■□□□ 1.88
ATPAF1-213ENST00000574428 MYH9P35579 1960 aaKnown RBP26.77■■□□□ 1.88
ATPAF1-213ENST00000574428 OATP04181 439 aa26.76■■□□□ 1.88
ATPAF1-213ENST00000574428 MARK3P27448 753 aa26.76■■□□□ 1.88
ATPAF1-213ENST00000574428 NPEPPSP55786 919 aa26.76■■□□□ 1.88
ATPAF1-213ENST00000574428 IRX5P78411 483 aaPredicted RBP26.76■■□□□ 1.88
ATPAF1-213ENST00000574428 GAS2L3Q86XJ1 694 aa26.76■■□□□ 1.88
ATPAF1-213ENST00000574428 ANKEF1Q9NU02 776 aa26.76■■□□□ 1.88
ATPAF1-213ENST00000574428 LOXHD1Q8IVV2 1947 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 SEPT4O43236 478 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 LGALS2P05162 132 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 KRT18P05783 430 aaKnown RBP26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 ZNF286BP0CG31 522 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 CCDC192P0DO97 292 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 XRCC6P12956 609 aaKnown RBP eCLIP26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 CACNB1Q02641 598 aaPredicted RBP26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 XKR9Q5GH70 373 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 XKR3Q5GH77 459 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 L1TD1Q5T7N2 865 aaKnown RBP26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 RINT1Q6NUQ1 792 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 SLAIN1Q8ND83 568 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 GSDMAQ96QA5 445 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 AP5M1Q9H0R1 490 aa26.76■■□□□ 1.87
ATPAF1-213ENST00000574428 KLRC4O43908 158 aa26.75■■□□□ 1.87
ATPAF1-213ENST00000574428 MAP3K21Q5TCX8 1036 aa26.75■■□□□ 1.87
ATPAF1-213ENST00000574428 OTUD6AQ7L8S5 288 aa26.75■■□□□ 1.87
ATPAF1-213ENST00000574428 DNAJC19Q96DA6 116 aa26.75■■□□□ 1.87
ATPAF1-213ENST00000574428 SMARCAD1Q9H4L7 1026 aa26.75■■□□□ 1.87
ATPAF1-213ENST00000574428 BMP2KQ9NSY1 1161 aaPredicted RBP26.75■■□□□ 1.87
ATPAF1-213ENST00000574428 DUSP11O75319 330 aaKnown RBP26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 PPFIA4O75335 1185 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 INHAP05111 366 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 CNNM4Q6P4Q7 775 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 PADI6Q6TGC4 694 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 PLPPR4Q7Z2D5 763 aa26.74■■□□□ 1.87
ATPAF1-213ENST00000574428 Q9Y3F1 56 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms