RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 PBX2P40425 430 aa31.34■■■□□ 2.61
SCARF1-207ENST00000573867 HAS1Q92839 578 aa31.34■■■□□ 2.61
SCARF1-207ENST00000573867 ZBBXA8MT70 800 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 HBP1O60381 514 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 PARNO95453 639 aaKnown RBP31.33■■■□□ 2.61
SCARF1-207ENST00000573867 FAM26DQ5JW98 314 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 TAF2Q6P1X5 1199 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 RPAINQ86UA6 219 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 FBXO18Q8NFZ0 1043 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 DNAJB3Q8WWF6 145 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 MTIF3Q9H2K0 278 aaKnown RBP31.33■■■□□ 2.61
SCARF1-207ENST00000573867 VAV3Q9UKW4 847 aa31.33■■■□□ 2.61
SCARF1-207ENST00000573867 KAT6AQ92794 2004 aa31.32■■■□□ 2.61
SCARF1-207ENST00000573867 MGAT3Q09327 533 aa31.32■■■□□ 2.6
SCARF1-207ENST00000573867 DEFB123Q8N688 67 aa31.32■■■□□ 2.6
SCARF1-207ENST00000573867 IL27Q8NEV9 243 aa31.32■■■□□ 2.6
SCARF1-207ENST00000573867 SLC4A7Q9Y6M7 1214 aa31.32■■■□□ 2.6
SCARF1-207ENST00000573867 CHRNA1P02708 482 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 ACTN1P12814 892 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 SFNP31947 248 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 JAK3P52333 1124 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 CNKSR3Q6P9H4 555 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 TRMT1LQ7Z2T5 733 aaKnown RBP31.31■■■□□ 2.6
SCARF1-207ENST00000573867 FAM184AQ8NB25 1140 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 PBX4Q9BYU1 374 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 CHD9Q3L8U1 2897 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 SIP14410 1827 aa31.31■■■□□ 2.6
SCARF1-207ENST00000573867 EML1O00423 815 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 DNAJB2P25686 324 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 MTHFD1LQ6UB35 978 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 MIER3Q7Z3K6 550 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 CKAP2LQ8IYA6 745 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 FAM20AQ96MK3 541 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 NAP1L4Q99733 375 aaKnown RBP31.3■■■□□ 2.6
SCARF1-207ENST00000573867 FAM49AQ9H0Q0 323 aaPredicted RBP31.3■■■□□ 2.6
SCARF1-207ENST00000573867 TTYH1Q9H313 450 aaPredicted RBP31.3■■■□□ 2.6
SCARF1-207ENST00000573867 PCDHA2Q9Y5H9 948 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 WDR81Q562E7 1941 aa31.3■■■□□ 2.6
SCARF1-207ENST00000573867 KIF28PB7ZC32 967 aa31.29■■■□□ 2.6
SCARF1-207ENST00000573867 DBF4BQ8NFT6 615 aa31.29■■■□□ 2.6
SCARF1-207ENST00000573867 RDM1Q8NG50 284 aa31.29■■■□□ 2.6
SCARF1-207ENST00000573867 BBXQ8WY36 941 aaPredicted RBP31.29■■■□□ 2.6
SCARF1-207ENST00000573867 TNPO1Q92973 898 aaKnown RBP31.29■■■□□ 2.6
SCARF1-207ENST00000573867 COL1A2P08123 1366 aa31.29■■■□□ 2.6
SCARF1-207ENST00000573867 TBX3O15119 743 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 KLRC1P26715 233 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 MCM2P49736 904 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 RABGGTBP53611 331 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 PRKCEQ02156 737 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 PPP2R5CQ13362 524 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 SAFBQ15424 915 aaKnown RBP eCLIP31.28■■■□□ 2.6
SCARF1-207ENST00000573867 PLEKHG4Q58EX7 1191 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 ZNF484Q5JVG2 852 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 FAM161BQ96MY7 647 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 CDH23Q9H251 3354 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 MTMR10Q9NXD2 777 aa31.28■■■□□ 2.6
SCARF1-207ENST00000573867 BAIAP3O94812 1187 aa31.27■■■□□ 2.6
SCARF1-207ENST00000573867 ATP2A2P16615 1042 aaKnown RBP31.27■■■□□ 2.6
SCARF1-207ENST00000573867 WDR5P61964 334 aaKnown RBP31.27■■■□□ 2.6
SCARF1-207ENST00000573867 MKRN4PQ13434 485 aaPredicted RBP31.27■■■□□ 2.6
SCARF1-207ENST00000573867 FOXP1Q9H334 677 aaPredicted RBP31.27■■■□□ 2.6
SCARF1-207ENST00000573867 YBX2Q9Y2T7 364 aaKnown RBP31.27■■■□□ 2.6
SCARF1-207ENST00000573867 CDY2AQ9Y6F7 541 aa31.27■■■□□ 2.6
SCARF1-207ENST00000573867 PTPRSQ13332 1948 aa31.27■■■□□ 2.6
SCARF1-207ENST00000573867 STBD1O95210 358 aa31.26■■■□□ 2.59
SCARF1-207ENST00000573867 C22orf31O95567 290 aa31.26■■■□□ 2.59
SCARF1-207ENST00000573867 OATP04181 439 aa31.26■■■□□ 2.59
SCARF1-207ENST00000573867 DEFB103AP81534 67 aa31.26■■■□□ 2.59
SCARF1-207ENST00000573867 SPIRE1Q08AE8 756 aa31.26■■■□□ 2.59
SCARF1-207ENST00000573867 GBF1Q92538 1859 aa31.26■■■□□ 2.59
SCARF1-207ENST00000573867 MYH9P35579 1960 aaKnown RBP31.25■■■□□ 2.59
SCARF1-207ENST00000573867 SMIM35A0A1B0GVV1 85 aa31.25■■■□□ 2.59
SCARF1-207ENST00000573867 MYOGP15173 224 aa31.25■■■□□ 2.59
SCARF1-207ENST00000573867 MRPS6P82932 125 aaKnown RBP31.25■■■□□ 2.59
SCARF1-207ENST00000573867 TMEM62Q0P6H9 643 aa31.25■■■□□ 2.59
SCARF1-207ENST00000573867 ZNF697Q5TEC3 545 aa31.25■■■□□ 2.59
SCARF1-207ENST00000573867 TMCO2Q7Z6W1 182 aaPredicted RBP31.25■■■□□ 2.59
SCARF1-207ENST00000573867 RSPH3Q86UC2 560 aa31.25■■■□□ 2.59
SCARF1-207ENST00000573867 BANK1Q8NDB2 785 aa31.25■■■□□ 2.59
SCARF1-207ENST00000573867 SEMA6BQ9H3T3 888 aa31.25■■■□□ 2.59
SCARF1-207ENST00000573867 TMEM150BA6NC51 233 aa31.24■■■□□ 2.59
SCARF1-207ENST00000573867 GHRP10912 638 aa31.24■■■□□ 2.59
SCARF1-207ENST00000573867 ATP2B1P20020 1258 aa31.24■■■□□ 2.59
SCARF1-207ENST00000573867 TIFAQ96CG3 184 aa31.24■■■□□ 2.59
SCARF1-207ENST00000573867 FAM167AQ96KS9 214 aa31.24■■■□□ 2.59
SCARF1-207ENST00000573867 GUCD1Q96NT3 240 aa31.24■■■□□ 2.59
SCARF1-207ENST00000573867 TMEM60Q9H2L4 133 aa31.24■■■□□ 2.59
SCARF1-207ENST00000573867 ABHD14A-ACY1A0A1B0GW23 586 aa31.23■■■□□ 2.59
SCARF1-207ENST00000573867 GJB2P29033 226 aa31.23■■■□□ 2.59
SCARF1-207ENST00000573867 LPIN1Q14693 890 aa31.23■■■□□ 2.59
SCARF1-207ENST00000573867 KIAA0319LQ8IZA0 1049 aa31.23■■■□□ 2.59
SCARF1-207ENST00000573867 SLC9A7Q96T83 725 aa31.23■■■□□ 2.59
SCARF1-207ENST00000573867 WRAP73Q9P2S5 460 aaPredicted RBP31.23■■■□□ 2.59
SCARF1-207ENST00000573867 NEMFO60524 1076 aa31.22■■■□□ 2.59
SCARF1-207ENST00000573867 CALCRLQ16602 461 aa31.22■■■□□ 2.59
SCARF1-207ENST00000573867 FBXO47Q5MNV8 452 aa31.22■■■□□ 2.59
SCARF1-207ENST00000573867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP31.22■■■□□ 2.59
SCARF1-207ENST00000573867 NOSTRINQ8IVI9 506 aa31.22■■■□□ 2.59
SCARF1-207ENST00000573867 MTMR9Q96QG7 549 aa31.22■■■□□ 2.59
SCARF1-207ENST00000573867 NKX2-4Q9H2Z4 354 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms