RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TIMP1P01033 207 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 HSP90AA1P07900 732 aaKnown RBP17.81■□□□□ 0.44
CHD3-215ENST00000572750 SFNP31947 248 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 TOB1P50616 345 aaPredicted RBP17.81■□□□□ 0.44
CHD3-215ENST00000572750 PPP2R5CQ13362 524 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 ZNF174Q15697 407 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 PLPPR4Q7Z2D5 763 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 SLFN12Q8IYM2 578 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 DHX38Q92620 1227 aaKnown RBP17.81■□□□□ 0.44
CHD3-215ENST00000572750 ATP6V0A1Q93050 837 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 WNT8BQ93098 351 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 WNT8AQ9H1J5 351 aa17.81■□□□□ 0.44
CHD3-215ENST00000572750 SIP14410 1827 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 EML1O00423 815 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 TREHO43280 583 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 PDCP20941 246 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 SYT1P21579 422 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 IGBP1P78318 339 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 SPIRE1Q08AE8 756 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 GRIK4Q16099 956 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 NCAPH2Q6IBW4 605 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 TRMT1LQ7Z2T5 733 aaKnown RBP17.8■□□□□ 0.44
CHD3-215ENST00000572750 FERMT3Q86UX7 667 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 CKAP2LQ8IYA6 745 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 SPRYD3Q8NCJ5 442 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 TRAPPC12Q8WVT3 735 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 ZBTB10Q96DT7 871 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 MTMR9Q96QG7 549 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 PCDHB6Q9Y5E3 794 aa17.8■□□□□ 0.44
CHD3-215ENST00000572750 ARID2Q68CP9 1835 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 NRCAMQ92823 1304 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 POTEB3A0JP26 581 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 RBAK-RBAKDNI3L0D1 243 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 BAG4O95429 457 aaKnown RBP17.79■□□□□ 0.44
CHD3-215ENST00000572750 INSRRP14616 1297 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 ATP4AP20648 1035 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 SLC26A2P50443 739 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 CCL23P55773 120 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 PRKCEQ02156 737 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 POTEBQ6S5H4 581 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 SERINC5Q86VE9 423 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 BANK1Q8NDB2 785 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 RDM1Q8NG50 284 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 ATP8B4Q8TF62 1192 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 TUBE1Q9UJT0 475 aa17.79■□□□□ 0.44
CHD3-215ENST00000572750 MAFBQ9Y5Q3 323 aaPredicted RBP17.79■□□□□ 0.44
CHD3-215ENST00000572750 ZNF862O60290 1169 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 OR52Z1P0C646 297 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 TXKP42681 527 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 ADAM17P78536 824 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 FPGSQ05932 587 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 PTK7Q13308 1070 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 ORC2Q13416 577 aaPredicted RBP17.78■□□□□ 0.44
CHD3-215ENST00000572750 MFSD5Q6N075 450 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 SCLYQ96I15 445 aa17.78■□□□□ 0.44
CHD3-215ENST00000572750 TTC12Q9H892 705 aaPredicted RBP17.78■□□□□ 0.44
CHD3-215ENST00000572750 CHD7Q9P2D1 2997 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 POTEMA6NI47 508 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 PITPNM1O00562 1244 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 OATP04181 439 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 GNAT1P11488 350 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 CSF2RAP15509 400 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 EPHB4P54760 987 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 BFSP2Q13515 415 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.44
CHD3-215ENST00000572750 RILPL1Q5EBL4 403 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 MARCH8Q5T0T0 291 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 RUFY4Q6ZNE9 571 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 CCDC155Q8N6L0 562 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 CAGE1Q8TC20 777 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 PCDHA12Q9UN75 941 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 MTMR6Q9Y217 621 aa17.77■□□□□ 0.44
CHD3-215ENST00000572750 TMEM150BA6NC51 233 aa17.76■□□□□ 0.43
CHD3-215ENST00000572750 ZBTB42B2RXF5 422 aa17.76■□□□□ 0.43
CHD3-215ENST00000572750 CKBP12277 381 aa17.76■□□□□ 0.43
CHD3-215ENST00000572750 SMAD3P84022 425 aaKnown RBP17.76■□□□□ 0.43
CHD3-215ENST00000572750 RESTQ13127 1097 aa17.76■□□□□ 0.43
CHD3-215ENST00000572750 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
CHD3-215ENST00000572750 TMEM199Q8N511 208 aa17.76■□□□□ 0.43
CHD3-215ENST00000572750 MBLAC1A4D2B0 266 aaPredicted RBP17.75■□□□□ 0.43
CHD3-215ENST00000572750 STX6O43752 255 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 HBP1O60381 514 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 CTSHP09668 335 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 THPOP40225 353 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 CYP4A11Q02928 519 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 RBL2Q08999 1139 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 PTGDRQ13258 359 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 LRRC8DQ7L1W4 858 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 C4orf32Q8N8J7 132 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 BBXQ8WY36 941 aaPredicted RBP17.75■□□□□ 0.43
CHD3-215ENST00000572750 FAM167AQ96KS9 214 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 LXNQ9BS40 222 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.75■□□□□ 0.43
CHD3-215ENST00000572750 RGL1Q9NZL6 768 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 WRAP73Q9P2S5 460 aaPredicted RBP17.75■□□□□ 0.43
CHD3-215ENST00000572750 SEPT9Q9UHD8 586 aaPredicted RBP17.75■□□□□ 0.43
CHD3-215ENST00000572750 PIEZO1Q92508 2521 aa17.75■□□□□ 0.43
CHD3-215ENST00000572750 COL1A2P08123 1366 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms