RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TFAP4Q01664 338 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 LRRC41Q15345 812 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 PPP2R5EQ16537 467 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 TRIM59Q8IWR1 403 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 MARCH10Q8NA82 808 aaPredicted RBP16.79■□□□□ 0.28
SMG6-207ENST00000570756 PNMA5Q96PV4 448 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 SELENOSQ9BQE4 189 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
SMG6-207ENST00000570756 ATAD5Q96QE3 1844 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 CYTH3O43739 400 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 CAND2O75155 1236 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 FLOT1O75955 427 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMG6-207ENST00000570756 EVX2Q03828 476 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 PTK2Q05397 1052 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 ZNF268Q14587 947 aaPredicted RBP16.79■□□□□ 0.28
SMG6-207ENST00000570756 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
SMG6-207ENST00000570756 TBC1D1Q86TI0 1168 aaPredicted RBP16.79■□□□□ 0.28
SMG6-207ENST00000570756 ARMC2Q8NEN0 867 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 TPCN2Q8NHX9 752 aa16.79■□□□□ 0.28
SMG6-207ENST00000570756 GCKP35557 465 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 IL6STP40189 918 aaPredicted RBP16.78■□□□□ 0.28
SMG6-207ENST00000570756 CALCRLQ16602 461 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 SUSD4Q5VX71 490 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 POTEAQ6S8J7 498 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 KIRREL3Q8IZU9 778 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 ATXN2LQ8WWM7 1075 aaKnown RBP16.78■□□□□ 0.28
SMG6-207ENST00000570756 THOC1Q96FV9 657 aaKnown RBP16.78■□□□□ 0.28
SMG6-207ENST00000570756 TXLNGYQ9BZA5 131 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 GANQ9H2C0 597 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 DPH5Q9H2P9 285 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 CCDC134Q9H6E4 229 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 TRPC6Q9Y210 931 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
SMG6-207ENST00000570756 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 ZBTB48P10074 688 aaPredicted RBP16.78■□□□□ 0.28
SMG6-207ENST00000570756 CYP2D6P10635 497 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 ITGA4P13612 1032 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 GRIK3Q13003 919 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 DENND2CQ68D51 928 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 VPS36Q86VN1 386 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 NEK9Q8TD19 979 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 ZNF384Q8TF68 577 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 GOLPH3Q9H4A6 298 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
SMG6-207ENST00000570756 A0A0A6YYK5 440 aaPredicted RBP16.77■□□□□ 0.28
SMG6-207ENST00000570756 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
SMG6-207ENST00000570756 C11orf91Q3C1V1 193 aa16.77■□□□□ 0.28
SMG6-207ENST00000570756 KRT79Q5XKE5 535 aa16.77■□□□□ 0.28
SMG6-207ENST00000570756 ALKBH5Q6P6C2 394 aaKnown RBP16.77■□□□□ 0.28
SMG6-207ENST00000570756 SLFN11Q7Z7L1 901 aa16.77■□□□□ 0.28
SMG6-207ENST00000570756 PROCA1Q8NCQ7 364 aaPredicted RBP16.77■□□□□ 0.28
SMG6-207ENST00000570756 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
SMG6-207ENST00000570756 NSUN4Q96CB9 384 aaKnown RBP16.77■□□□□ 0.28
SMG6-207ENST00000570756 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
SMG6-207ENST00000570756 STMN4Q9H169 189 aaPredicted RBP16.77■□□□□ 0.28
SMG6-207ENST00000570756 PABPC3Q9H361 631 aaKnown RBP16.77■□□□□ 0.28
SMG6-207ENST00000570756 IL17RBQ9NRM6 502 aa16.77■□□□□ 0.28
SMG6-207ENST00000570756 INTS9Q9NV88 658 aaKnown RBP16.77■□□□□ 0.28
SMG6-207ENST00000570756 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 ALADP13716 330 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 COASYQ13057 564 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 SLC35G1Q2M3R5 365 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 BZW1Q7L1Q6 419 aaKnown RBP16.77■□□□□ 0.27
SMG6-207ENST00000570756 ZNF571Q7Z3V5 609 aaPredicted RBP16.77■□□□□ 0.27
SMG6-207ENST00000570756 SEPT12Q8IYM1 358 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 LRRC34Q8IZ02 419 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 GBP7Q8N8V2 638 aaPredicted RBP16.77■□□□□ 0.27
SMG6-207ENST00000570756 SPDL1Q96EA4 605 aa16.77■□□□□ 0.27
SMG6-207ENST00000570756 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.27
SMG6-207ENST00000570756 TTC7AQ9ULT0 858 aaPredicted RBP16.77■□□□□ 0.27
SMG6-207ENST00000570756 PALM3A6NDB9 673 aaPredicted RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 RGS16O15492 202 aaPredicted RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 VIMP08670 466 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 ZNF131P52739 623 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 ICA1Q05084 483 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 PDIA5Q14554 519 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 FAM133BQ5BKY9 247 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 GLIS3Q8NEA6 775 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 SNX29Q8TEQ0 813 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 MTMR9Q96QG7 549 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 NAP1L3Q99457 506 aaPredicted RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 ELAC2Q9BQ52 826 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 SPZ1Q9BXG8 430 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 MOV10L1Q9BXT6 1211 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 CELF4Q9BZC1 486 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 BMP2KQ9NSY1 1161 aaPredicted RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 AGTP01019 485 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 NQO1P15559 274 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 CCND1P24385 295 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 PMS2P54278 862 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 NPEPPSP55786 919 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 PTF1AQ7RTS3 328 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 IRF2BP2Q7Z5L9 587 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 DAAM2Q86T65 1068 aa16.76■□□□□ 0.27
SMG6-207ENST00000570756 REXO1Q8N1G1 1221 aaKnown RBP16.76■□□□□ 0.27
SMG6-207ENST00000570756 AGAP11Q8TF27 550 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms