RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 INPP4AQ96PE3 977 aaPredicted RBP12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 TMX1Q9H3N1 280 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 AAASQ9NRG9 546 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 LRFN2Q9ULH4 789 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 PCDHA1Q9Y5I3 950 aa12.09□□□□□ -0.47
CTDNEP1-202ENST00000570380 OTOGLQ3ZCN5 2332 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 HIDE1A8MVS5 230 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 TRIM6-TRIM34B2RNG4 842 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 ZBTB5O15062 677 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 FIBPO43427 364 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 STAM2O75886 525 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 NPR3P17342 541 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 TMEM62Q0P6H9 643 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 ANGPT1Q15389 498 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 IER5Q5VY09 327 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 ZNF589Q86UQ0 364 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 CCDC105Q8IYK2 499 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 THNSL1Q8IYQ7 743 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 ENAHQ8N8S7 591 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 FLCNQ8NFG4 579 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 ADAM7Q9H2U9 754 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 RNF41Q9H4P4 317 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 TYW1Q9NV66 732 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 LIMD1Q9UGP4 676 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
CTDNEP1-202ENST00000570380 TBKBP1A7MCY6 615 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 AOC1P19801 751 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 MX1P20591 662 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 MARK3P27448 753 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 SARSP49591 514 aaKnown RBP12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 IGBP1P78318 339 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 PAK2Q13177 524 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 PUM1Q14671 1186 aaKnown RBP eCLIP12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 FAM102BQ5T8I3 360 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 C20orf194Q5TEA3 1177 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 IQCA1Q86XH1 822 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 ZDHHC14Q8IZN3 488 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 KCNG4Q8TDN1 519 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 MRPS27Q92552 414 aaKnown RBP12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 EVI5LQ96CN4 794 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 NECTIN4Q96NY8 510 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 ZSCAN10Q96SZ4 725 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 TCF25Q9BQ70 676 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 SENP7Q9BQF6 1050 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 FAM49AQ9H0Q0 323 aaPredicted RBP12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 CWH43Q9H720 699 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 LZTS1Q9Y250 596 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 PCDHB7Q9Y5E2 793 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 TRPV2Q9Y5S1 764 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 IGSF9BQ9UPX0 1349 aa12.07□□□□□ -0.48
CTDNEP1-202ENST00000570380 ACACBO00763 2458 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 GSTTP1A0A1W2PQM5 241 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 MGEA5O60502 916 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 LMNAP02545 664 aaKnown RBP12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 WEE2P0C1S8 567 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 ITIH3Q06033 890 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 TMEM266Q2M3C6 531 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 SLC35G1Q2M3R5 365 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 CES5AQ6NT32 575 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 DTWD2Q8NBA8 298 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 CASP10Q92851 521 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 ENTPD7Q9NQZ7 604 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 ERAP1Q9NZ08 941 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 C2orf16Q68DN1 1984 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 SALL3Q9BXA9 1300 aa12.06□□□□□ -0.48
CTDNEP1-202ENST00000570380 CACNA1GO43497 2377 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 B4E1Z4 1266 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 ATP9AO75110 1047 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 RPLP2P05387 115 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 INSRRP14616 1297 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 MTHFRP42898 656 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 NFX1Q12986 1120 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 CELF4Q9BZC1 486 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 SEMA4AQ9H3S1 761 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 NGRNQ9NPE2 291 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 DLL3Q9NYJ7 618 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 PUF60Q9UHX1 559 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 MAD2L2Q9UI95 211 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 HCFC2Q9Y5Z7 792 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 SPTBN2O15020 2390 aa12.05□□□□□ -0.48
CTDNEP1-202ENST00000570380 M0QZ92 97 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 ZNF213O14771 459 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 LAG3P18627 525 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 NMIQ13287 307 aaPredicted RBP12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 KANK3Q6NY19 840 aa12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 C12orf76Q8N812 135 aaPredicted RBP12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 TDRD5Q8NAT2 981 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-202ENST00000570380 GIMAP8Q8ND71 665 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms