RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 RUSC2Q8N2Y8 1516 aa4.87□□□□□ -1.63
UBR1-211ENST00000569971 A0A1W2PQ45 241 aaPredicted RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 A0A1W2PQY0 241 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 E2F8A0AVK6 867 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 MAN2B1O00754 1011 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 KIF3BO15066 747 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 PRPF3O43395 683 aaKnown RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 NRDCO43847 1150 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 ABLIM3O94929 683 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 MPOP05164 745 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 ATF3P18847 181 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 CCND1P24385 295 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 IRF9Q00978 393 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 KLF1Q13351 362 aaPredicted RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 PCBP2Q15366 365 aaKnown RBP eCLIP4.86□□□□□ -1.63
UBR1-211ENST00000569971 HABP4Q5JVS0 413 aaKnown RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 OTOP3Q7RTS5 596 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 SP8Q8IXZ3 490 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 CMIPQ8IY22 773 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 TTC8Q8TAM2 541 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 PIP4K2CQ8TBX8 421 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 SH3RF2Q8TEC5 729 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 USP33Q8TEY7 942 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 JPH3Q8WXH2 748 aaPredicted RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 ELF4Q99607 663 aaPredicted RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 MTA3Q9BTC8 594 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 MS4A5Q9H3V2 200 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 TOPORSQ9NS56 1045 aaPredicted RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 MBD1Q9UIS9 605 aaPredicted RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 LUC7L2Q9Y383 392 aaKnown RBP4.86□□□□□ -1.63
UBR1-211ENST00000569971 X6R8D5 127 aa4.86□□□□□ -1.63
UBR1-211ENST00000569971 FZD9O00144 591 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 N4BP3O15049 544 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 PEX14O75381 377 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 USP2O75604 605 aaPredicted RBP4.85□□□□□ -1.63
UBR1-211ENST00000569971 DGKIO75912 1065 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 PNLIPP16233 465 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 GNALP38405 381 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 SCAND1P57086 179 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 SMAD3P84022 425 aaKnown RBP4.85□□□□□ -1.63
UBR1-211ENST00000569971 TERF2Q15554 542 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 ZNF174Q15697 407 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 SMAD2Q15796 467 aaKnown RBP4.85□□□□□ -1.63
UBR1-211ENST00000569971 ADGRF1Q5T601 910 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 PGM2L1Q6PCE3 622 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 HHIPL2Q6UWX4 724 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 SLCO6A1Q86UG4 719 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 RASSF3Q86WH2 238 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 RBM12BQ8IXT5 1001 aaKnown RBP4.85□□□□□ -1.63
UBR1-211ENST00000569971 Q8N1Y9 231 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 LZTR1Q8N653 840 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 KIAA1958Q8N8K9 716 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 NLGN2Q8NFZ4 835 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.85□□□□□ -1.63
UBR1-211ENST00000569971 DACT3Q96B18 629 aaPredicted RBP4.85□□□□□ -1.63
UBR1-211ENST00000569971 FAXDC2Q96IV6 333 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 SCYL1Q96KG9 808 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 RHOBTB2Q9BYZ6 727 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 CD244Q9BZW8 370 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 XYLT2Q9H1B5 865 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 EPB41L1Q9H4G0 881 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 LUC7LQ9NQ29 371 aaKnown RBP4.85□□□□□ -1.63
UBR1-211ENST00000569971 TOMM22Q9NS69 142 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.85□□□□□ -1.63
UBR1-211ENST00000569971 FBLN5Q9UBX5 448 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 DSEQ9UL01 958 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 COA3Q9Y2R0 106 aaPredicted RBP4.85□□□□□ -1.63
UBR1-211ENST00000569971 SPO11Q9Y5K1 396 aa4.85□□□□□ -1.63
UBR1-211ENST00000569971 WASHC2AQ641Q2 1341 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 LCHNA4D1U4 455 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 GOLGA8AA7E2F4 631 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 GOLGA8BA8MQT2 603 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 SCDO00767 359 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 PSPNO60542 156 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 SNUPNO95149 360 aaKnown RBP4.84□□□□□ -1.63
UBR1-211ENST00000569971 TACR1P25103 407 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 PTX3P26022 381 aaPredicted RBP4.84□□□□□ -1.63
UBR1-211ENST00000569971 KIF11P52732 1056 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 YBX1P67809 324 aaKnown RBP4.84□□□□□ -1.63
UBR1-211ENST00000569971 CYP4F8P98187 520 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 CAP1Q01518 475 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 SSPNQ14714 243 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 KIR3DS1Q14943 382 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 ODF1Q14990 250 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 MLC1Q15049 377 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 SEC23AQ15436 765 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 MAP9Q49MG5 647 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 FAM102BQ5T8I3 360 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 CPZQ66K79 652 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 EP400NLQ6ZTU2 488 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 CABP7Q86V35 215 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 NOSTRINQ8IVI9 506 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 CCAR1Q8IX12 1150 aaKnown RBP4.84□□□□□ -1.63
UBR1-211ENST00000569971 CAMKK2Q96RR4 588 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 SIRT5Q9NXA8 310 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 IMPACTQ9P2X3 320 aa4.84□□□□□ -1.63
UBR1-211ENST00000569971 NOC2LQ9Y3T9 749 aaKnown RBP4.84□□□□□ -1.63
UBR1-211ENST00000569971 PRDM2Q13029 1718 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 ERICH3Q5RHP9 1530 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 CFTRP13569 1480 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms