RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SEC23AQ15436 765 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 RTN1Q16799 776 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 ARSJQ5FYB0 599 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-219ENST00000569882 FAM47CQ5HY64 1035 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 CPLX2Q6PUV4 134 aaKnown RBP5.55□□□□□ -1.52
CNOT1-219ENST00000569882 MAMDC4Q6UXC1 1216 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 SEPT14Q6ZU15 432 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 STOX1Q6ZVD7 989 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 DHX32Q7L7V1 743 aaKnown RBP5.55□□□□□ -1.52
CNOT1-219ENST00000569882 MB21D2Q8IYB1 491 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-219ENST00000569882 STAG2Q8N3U4 1231 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 FAM133AQ8N9E0 248 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 TRPV1Q8NER1 839 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 DNERQ8NFT8 737 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 OR6J1Q8NGC5 347 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 SCFD2Q8WU76 684 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 ANKS1AQ92625 1134 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 TCEANC2Q96MN5 208 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 PIGSQ96S52 555 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 MTA3Q9BTC8 594 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 WDR11Q9BZH6 1224 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 JMJD4Q9H9V9 463 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 LY9Q9HBG7 655 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 RBM28Q9NW13 759 aaKnown RBP5.55□□□□□ -1.52
CNOT1-219ENST00000569882 MAD2L2Q9UI95 211 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 HTTP42858 3142 aa5.55□□□□□ -1.52
CNOT1-219ENST00000569882 CEP290O15078 2479 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 MROH7Q68CQ1 1323 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 LOC102724159A0A0B4J2E5 919 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 DCDC2BA2VCK2 349 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 PALM3A6NDB9 673 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 SPDYE3A6NKU9 549 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 NOP56O00567 594 aaKnown RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 ATXN7O15265 892 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 SNAI1O95863 264 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 MYL3P08590 195 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 ZNF865P0CJ78 1059 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 TXNP10599 105 aaKnown RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 CD33P20138 364 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 CCND2P30279 289 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 HOXA13P31271 388 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 LIFRP42702 1097 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 METAP2P50579 478 aaKnown RBP eCLIP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 ACLYP53396 1101 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 NAPAP54920 295 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 NECTIN1Q15223 517 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 PWP2Q15269 919 aaKnown RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 STXBP2Q15833 593 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 FSCN1Q16658 493 aaKnown RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 GNPTABQ3T906 1256 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 TRIM60Q495X7 471 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 SH3PXD2AQ5TCZ1 1133 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 IQSEC1Q6DN90 963 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 Q6ZUG5 572 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 FANCBQ8NB91 859 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 C1orf216Q8TAB5 229 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 IGDCC4Q8TDY8 1250 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 BRF1Q92994 677 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 UBE2OQ9C0C9 1292 aaKnown RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 UPF2Q9HAU5 1272 aaKnown RBP5.54□□□□□ -1.52
CNOT1-219ENST00000569882 TCEAL9Q9UHQ7 104 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 PCDHGC4Q9Y5F7 938 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 CYP46A1Q9Y6A2 500 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 MRVI1Q9Y6F6 885 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 TAF6LQ9Y6J9 622 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 MYH7BA7E2Y1 1941 aa5.54□□□□□ -1.52
CNOT1-219ENST00000569882 KIAA1217Q5T5P2 1943 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 ALPK3Q96L96 1907 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 A0A0U1RQG5 324 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 A0A1W2PQ45 241 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 A0A1W2PQY0 241 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 BACH1O14867 736 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 NKRFO15226 690 aaKnown RBP eCLIP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 ATP9BO43861 1147 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 LZTS3O60299 673 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 CABYRO75952 493 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 PLEKHA8P1O95397 391 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 GH1P01241 217 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 ASGR1P07306 291 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 MAPTP10636 758 aaKnown RBP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 RAG1P15918 1043 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 ZNF76P36508 570 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 ANTXR2P58335 489 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 BEX3Q00994 111 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 TNP2Q05952 138 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 TROAPQ12815 778 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 KCNA10Q16322 511 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 LRRC26Q2I0M4 334 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 APOA5Q6Q788 366 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 SLC39A5Q6ZMH5 540 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 NLRP8Q86W28 1048 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 CMTR1Q8N1G2 835 aaKnown RBP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 SAMD3Q8N6K7 520 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 RGS22Q8NE09 1264 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 TPCN2Q8NHX9 752 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 SYTL5Q8TDW5 730 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 CCDC12Q8WUD4 166 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-219ENST00000569882 EDARADDQ8WWZ3 215 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 CLEC4DQ8WXI8 215 aa5.53□□□□□ -1.52
CNOT1-219ENST00000569882 TAAR1Q96RJ0 339 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms