RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 EMILIN3Q9NT22 766 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 TYW1Q9NV66 732 aaKnown RBP6.32□□□□□ -1.4
CDH13-213ENST00000569454 TCEAL9Q9UHQ7 104 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 DDX41Q9UJV9 622 aaKnown RBP6.32□□□□□ -1.4
CDH13-213ENST00000569454 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 SIK3Q9Y2K2 1263 aa6.32□□□□□ -1.4
CDH13-213ENST00000569454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDH13-213ENST00000569454 SPTBN5Q9NRC6 3674 aaKnown RBP6.32□□□□□ -1.4
CDH13-213ENST00000569454 CLRN2A0PK11 232 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 GTPBP10A4D1E9 387 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 CTAGE15A4D2H0 777 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 E9PMD0 336 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 FAM86B1E9PN63 330 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 OPLAHO14841 1288 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 MSH4O15457 936 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 CTNND1O60716 968 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 GAS7O60861 476 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 TACC1O75410 805 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 MED24O75448 989 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 PSMD10O75832 226 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 RAD17O75943 681 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 FAM13AO94988 1023 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 LCA5LO95447 670 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 CFBP00751 764 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 FAM86B2P0C5J1 330 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 CTAGE8P0CG41 777 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 EPB41P11171 864 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 DPEP1P16444 411 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 RFX1P22670 979 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 NR2F2P24468 414 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 ARHGAP25P42331 645 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 HSD17B4P51659 736 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 USP14P54578 494 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 ZNF280AP59817 542 aaPredicted RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 MYBPC2Q14324 1141 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 EPHA7Q15375 998 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 ECM1Q16610 540 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 PTPN21Q16825 1174 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 KNOP1Q1ED39 458 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 ERCC6LQ2NKX8 1250 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 SLC9C1Q4G0N8 1177 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 DALRD3Q5D0E6 543 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 FAM83BQ5T0W9 1011 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 C10orf76Q5T2E6 689 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 CCDC70Q6NSX1 233 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 FBXO38Q6PIJ6 1188 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 WDR59Q6PJI9 974 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 POTEEQ6S8J3 1075 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 EPM2AIP1Q7L775 607 aaPredicted RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 CTAGE6Q86UF2 777 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 CATSPER3Q86XQ3 398 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 CTAGE4Q8IX94 777 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 SMAP1Q8IYB5 467 aaPredicted RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 MSL3Q8N5Y2 521 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 PRPF38AQ8NAV1 312 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 ACRBPQ8NEB7 543 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 PURBQ96QR8 312 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 NACC1Q96RE7 527 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 EIF2AK1Q9BQI3 630 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 SLF1Q9BQI6 1058 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 TEKT3Q9BXF9 490 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 IFIH1Q9BYX4 1025 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 KCTD10Q9H3F6 313 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 MMRN2Q9H8L6 949 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 NHEJ1Q9H9Q4 299 aaPredicted RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 ARFGAP3Q9NP61 516 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 MYOZ2Q9NPC6 264 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 PLCB1Q9NQ66 1216 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 ZNF277Q9NRM2 450 aaPredicted RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 ARMCX3Q9UH62 379 aaPredicted RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 TSKSQ9UJT2 592 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 PCDHA2Q9Y5H9 948 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 PCDHAC2Q9Y5I4 1007 aa6.31□□□□□ -1.4
CDH13-213ENST00000569454 BZW2Q9Y6E2 419 aaKnown RBP6.31□□□□□ -1.4
CDH13-213ENST00000569454 RPTORQ8N122 1335 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 RBAK-RBAKDNI3L0D1 243 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 MEIS1O00470 390 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 WNT10BO00744 389 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 FANCGO15287 622 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 PJA2O43164 708 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 AKR1B10O60218 316 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 DKC1O60832 514 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-213ENST00000569454 COBLO75128 1261 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 GFPT2O94808 682 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SERPING1P05155 500 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SPATA31C1P0DKV0 1188 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
CDH13-213ENST00000569454 YBX3P16989 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH13-213ENST00000569454 GUCY2CP25092 1073 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 ABCD1P33897 745 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 ECE1P42892 770 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 KIF11P52732 1056 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 ZNF131P52739 623 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 OAZ1P54368 228 aa6.3□□□□□ -1.4
CDH13-213ENST00000569454 SNRPFP62306 86 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms