RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 PRPF40AO75400 957 aaKnown RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 ATG7O95352 703 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 SUPT20HL2P0C7V6 817 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 RARBP10826 455 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 MUTP22033 750 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 PTGS1P23219 599 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 CNGA1P29973 690 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 UBA7P41226 1012 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 NKX3-2P78367 333 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 SP4Q02446 784 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 HYIQ5T013 277 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 KRT79Q5XKE5 535 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 MIS18BP1Q6P0N0 1132 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 ABHD15Q6UXT9 468 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 USP49Q70CQ1 688 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 CABP7Q86V35 215 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 FSIP1Q8NA03 581 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 SLC39A7Q92504 469 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 EPSTI1Q96J88 318 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 GPR20Q99678 358 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 EIF2AK1Q9BQI3 630 aaKnown RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 MMTAG2Q9BU76 263 aaKnown RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 POLR3CQ9BUI4 534 aaPredicted RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDH3-210ENST00000569117 TUFT1Q9NNX1 390 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 PRM3Q9NNZ6 103 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 HMX1Q9NP08 348 aaPredicted RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 FAM13BQ9NYF5 915 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 DDX20Q9UHI6 824 aaKnown RBP11.71□□□□□ -0.53
CDH3-210ENST00000569117 HPSEQ9Y251 543 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
CDH3-210ENST00000569117 GSTTP1A0A1W2PQM5 241 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 LGR5O75473 907 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 PSAPP07602 524 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 MMP3P08254 477 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 PFKFB1P16118 471 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 PTMSP20962 102 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 RPA1P27694 616 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 CDC25AP30304 524 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 TCF7P36402 384 aaPredicted RBP11.7□□□□□ -0.54
CDH3-210ENST00000569117 CPT1AP50416 773 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 GJA9P57773 515 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 CCDC60Q8IWA6 550 aaPredicted RBP11.7□□□□□ -0.54
CDH3-210ENST00000569117 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 AFAP1L1Q8TED9 768 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 AFG1LQ8WV93 481 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 SEPT1Q8WYJ6 367 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 ARMC5Q96C12 935 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 LXNQ9BS40 222 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 AP5M1Q9H0R1 490 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 GOLPH3LQ9H4A5 285 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 PAK6Q9NQU5 681 aaPredicted RBP11.7□□□□□ -0.54
CDH3-210ENST00000569117 SAMM50Q9Y512 469 aa11.7□□□□□ -0.54
CDH3-210ENST00000569117 SCN10AQ9Y5Y9 1956 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 CTAGE5O15320 804 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 ADAMTS4O75173 837 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 MED24O75448 989 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
CDH3-210ENST00000569117 SPATA31C1P0DKV0 1188 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 CD46P15529 392 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 CST5P28325 142 aaPredicted RBP11.69□□□□□ -0.54
CDH3-210ENST00000569117 CCT6AP40227 531 aaKnown RBP11.69□□□□□ -0.54
CDH3-210ENST00000569117 QARSP47897 775 aaKnown RBP11.69□□□□□ -0.54
CDH3-210ENST00000569117 CYP4A11Q02928 519 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 FAM160A1Q05DH4 1040 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 GRB10Q13322 594 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 KARSQ15046 597 aaKnown RBP11.69□□□□□ -0.54
CDH3-210ENST00000569117 UGCGQ16739 394 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 TMEM119Q4V9L6 283 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 FAM160B1Q5W0V3 765 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 CCDC73Q6ZRK6 1079 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 CATSPER3Q86XQ3 398 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 CALML4Q96GE6 196 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 DYDC2Q96IM9 177 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 ZNF333Q96JL9 665 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 PYM1Q9BRP8 204 aaKnown RBP11.69□□□□□ -0.54
CDH3-210ENST00000569117 NT5C3AQ9H0P0 336 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 XPNPEP3Q9NQH7 507 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 RGL1Q9NZL6 768 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
CDH3-210ENST00000569117 A0A087X0B3 334 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 A0A1B0GVL5 298 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 RCCD1A6NED2 376 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 DYNC1LI2O43237 492 aaPredicted RBP11.68□□□□□ -0.54
CDH3-210ENST00000569117 DKC1O60832 514 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDH3-210ENST00000569117 SLITRK3O94933 977 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 LYPLA2O95372 231 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 MBD3O95983 291 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 LGALS2P05162 132 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 C7P10643 843 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 PLCG1P19174 1290 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 SLC26A2P50443 739 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 NDUFA8P51970 172 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms