RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	ZXDC	Q2QGD7	858 aa	Predicted RBP	4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	WDR72	Q3MJ13	1102 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	TRIM61	Q5EBN2	209 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	OVCH1	Q7RTY7	1134 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	PLEKHH3	Q7Z736	793 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	CIR1	Q86X95	450 aa	Predicted RBP	4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	ZSWIM2	Q8NEG5	633 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	THAP3	Q8WTV1	239 aa	Predicted RBP	4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	ERCC4	Q92889	916 aa	Predicted RBP	4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	AJUBA	Q96IF1	538 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	WWC2-AS2	Q96NR7	200 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	SAMD11	Q96NU1	681 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	AMN	Q9BXJ7	453 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	KRTAP4-5	Q9BYR2	181 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	NCOA5	Q9HCD5	579 aa	Known RBP	4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	INCENP	Q9NQS7	918 aa		4.62	□□□□□ -1.67
BBS4-215	ENST00000569001	PPP1R12A	O14974	1030 aa	Predicted RBP	4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	CD83	Q01151	205 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	TOP3A	Q13472	1001 aa	Predicted RBP	4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	ZNF460	Q14592	562 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	TMEM132B	Q14DG7	1078 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	CDSN	Q15517	529 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	RNF151	Q2KHN1	245 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	DBX2	Q6ZNG2	339 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	SPRED1	Q7Z699	444 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	JMY	Q8N9B5	988 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	SREK1	Q8WXA9	508 aa	Known RBP	4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	ASB15	Q8WXK1	588 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	MKL1	Q969V6	931 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	CELF4	Q9BZC1	486 aa	Known RBP	4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	KATNBL1	Q9H079	304 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	CD248	Q9HCU0	757 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	MAGEL2	Q9UJ55	1249 aa		4.61	□□□□□ -1.67
BBS4-215	ENST00000569001	PRAMEF22	A3QJZ6	481 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	GSTA4	O15217	222 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	FOXS1	O43638	330 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	EFCAB14	O75071	495 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	CLASP2	O75122	1294 aa	Known RBP	4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	NAT1	P18440	290 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	USP10	Q14694	798 aa	Known RBP	4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	SURF1	Q15526	300 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	TBR1	Q16650	682 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	C21orf62-AS1	Q17RA5	79 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	TMEM177	Q53S58	311 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	SLFN13	Q68D06	897 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	TCTN3	Q6NUS6	607 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	HIPK4	Q8NE63	616 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	LMF1	Q96S06	567 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	DPYSL5	Q9BPU6	564 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	PIF1	Q9H611	641 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	ZSWIM4	Q9H7M6	989 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	GALNT8	Q9NY28	637 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	CNOT11	Q9UKZ1	510 aa	Known RBP	4.6	□□□□□ -1.67
BBS4-215	ENST00000569001	SLC4A7	Q9Y6M7	1214 aa		4.6	□□□□□ -1.67
BBS4-215	ENST00000569001		M0R2C6	588 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	MATN3	O15232	486 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	GLRX3	O76003	335 aa	Known RBP	4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	CHGB	P05060	677 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	POLD1	P28340	1107 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	GJA4	P35212	333 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	STAT5B	P51692	787 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	IRF9	Q00978	393 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	CATSPERE	Q5SY80	951 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	OTOP2	Q7RTS6	562 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	TAX1BP1	Q86VP1	789 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	IFNL2	Q8IZJ0	200 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	C2orf69	Q8N8R5	385 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	SH3TC2	Q8TF17	1288 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	GBP4	Q96PP9	640 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	CARD11	Q9BXL7	1154 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	MRPL4	Q9BYD3	311 aa	Known RBP	4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	KLC2	Q9H0B6	622 aa		4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	TNPO3	Q9Y5L0	923 aa	Known RBP	4.59	□□□□□ -1.67
BBS4-215	ENST00000569001	SLC12A8	A0AV02	714 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	PATE3	B3GLJ2	98 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	MATN2	O00339	956 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	DVL2	O14641	736 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	FOXP2	O15409	715 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	DNAJC8	O75937	253 aa	Predicted RBP	4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	HMGCR	P04035	888 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	ZBTB48	P10074	688 aa	Predicted RBP	4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	TNFRSF1A	P19438	455 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	SDS	P20132	328 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	ECE1	P42892	770 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	ACAP1	Q15027	740 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	CCDC144B	Q3MJ40	725 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	SOGA3	Q5TF21	947 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	FILIP1	Q7Z7B0	1213 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	REXO1L1P	Q8IX06	675 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	TTC9B	Q8N6N2	239 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	DNER	Q8NFT8	737 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001		Q8TCH9	128 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	DLG3	Q92796	817 aa		4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	DVL3	Q92997	716 aa	Predicted RBP	4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	NEIL1	Q96FI4	390 aa	Predicted RBP	4.58	□□□□□ -1.68
BBS4-215	ENST00000569001	ZDHHC5	Q9C0B5	715 aa		4.58	□□□□□ -1.68

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