RNA–Protein interactions for RNA: ENST00000568850.5

RAB11A-207, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11A, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-207ENST00000568850 TIMP1P01033 207 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 MUTP22033 750 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 NUCB2P80303 420 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 PRKCEQ02156 737 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
RAB11A-207ENST00000568850 RSPH3Q86UC2 560 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 C4orf19Q8IY42 314 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 EXOC8Q8IYI6 725 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 IGSF22Q8N9C0 903 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 AK8Q96MA6 479 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
RAB11A-207ENST00000568850 LXNQ9BS40 222 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 HIPK3Q9H422 1215 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
RAB11A-207ENST00000568850 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 POTEMA6NI47 508 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 H0YGN5 161 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 MAGEB2O15479 319 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 ZNF862O60290 1169 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 SLITRK3O94933 977 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 LYPLA2O95372 231 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 PARNO95453 639 aaKnown RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 BRD1O95696 1058 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 CYP2C9P11712 490 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 ATP4AP20648 1035 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 IGBP1P78318 339 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 ADAM17P78536 824 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 UGCGQ16739 394 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 KRT79Q5XKE5 535 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 KCTD17Q8N5Z5 321 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 DYDC2Q96IM9 177 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 JPH2Q9BR39 696 aaPredicted RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 NIFKQ9BYG3 293 aaKnown RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 CFAP45Q9UL16 551 aa13.11□□□□□ -0.31
RAB11A-207ENST00000568850 ZMYND8Q9ULU4 1186 aaPredicted RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
RAB11A-207ENST00000568850 RANBP2P49792 3224 aaKnown RBP13.1□□□□□ -0.31
RAB11A-207ENST00000568850 TREHO43280 583 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 SLC26A4O43511 780 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 SYN1P17600 705 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 RPA1P27694 616 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 LONP1P36776 959 aaKnown RBP13.1□□□□□ -0.31
RAB11A-207ENST00000568850 CYP4A11Q02928 519 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 RBL2Q08999 1139 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 FAM173BQ6P4H8 233 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 NME8Q8N427 588 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 CCDC43Q96MW1 224 aaKnown RBP13.1□□□□□ -0.31
RAB11A-207ENST00000568850 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 RGL1Q9NZL6 768 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
RAB11A-207ENST00000568850 PCDHA2Q9Y5H9 948 aa13.1□□□□□ -0.31
RAB11A-207ENST00000568850 SMIM35A0A1B0GVV1 85 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 VWA3AA6NCI4 1184 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 SELPP16109 830 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 KLRC1P26715 233 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 TMOD1P28289 359 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 YWHABP31946 246 aaKnown RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 RFC2P35250 354 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 DNM2P50570 870 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 ZNF200P98182 395 aaPredicted RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 TBC1D8BQ0IIM8 1120 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 PKP1Q13835 747 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 CTTNQ14247 550 aaKnown RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 SLC39A14Q15043 492 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 STK38Q15208 465 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 MARCH8Q5T0T0 291 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 PRPF38BQ5VTL8 546 aaKnown RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 FOXD4L5Q5VV16 416 aaPredicted RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 MTHFD1LQ6UB35 978 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 TRMT1LQ7Z2T5 733 aaKnown RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 FOXD4L4Q8WXT5 416 aaPredicted RBP13.09□□□□□ -0.31
RAB11A-207ENST00000568850 CTAGE1Q96RT6 745 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 ANKEF1Q9NU02 776 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 CLIC4Q9Y696 253 aa13.09□□□□□ -0.31
RAB11A-207ENST00000568850 YEATS4O95619 227 aa13.08□□□□□ -0.32
RAB11A-207ENST00000568850 SPATA31C1P0DKV0 1188 aa13.08□□□□□ -0.32
RAB11A-207ENST00000568850 CYP2C18P33260 490 aa13.08□□□□□ -0.32
RAB11A-207ENST00000568850 THPOP40225 353 aa13.08□□□□□ -0.32
RAB11A-207ENST00000568850 RFC5P40937 340 aa13.08□□□□□ -0.32
RAB11A-207ENST00000568850 UBA7P41226 1012 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms