RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 AK8Q96MA6 479 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 CNOT8Q9UFF9 292 aaKnown RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 TDP2O95551 362 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 IFNB1P01574 187 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 HIBADHP31937 336 aaKnown RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 FNTAP49354 379 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 C6orf163Q5TEZ5 329 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 TGS1Q96RS0 853 aaKnown RBP11.81□□□□□ -0.52
PALB2-206ENST00000568219 ZCWPW1Q9H0M4 648 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 RIC8AQ9NPQ8 531 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 BATF3Q9NR55 127 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 DLGAP2Q9P1A6 1054 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 DCTN4Q9UJW0 460 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 MAP3K15Q6ZN16 1313 aa11.81□□□□□ -0.52
PALB2-206ENST00000568219 LDHBP07195 334 aaKnown RBP11.8□□□□□ -0.52
PALB2-206ENST00000568219 RASSF2P50749 326 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 TNIP1Q15025 636 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 ARMC3Q5W041 872 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 GJB7Q6PEY0 223 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 FBXO25Q8TCJ0 367 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 PCDHA6Q9UN73 950 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 TRIM33Q9UPN9 1127 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 C15orf41Q9Y2V0 281 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 USP15Q9Y4E8 981 aaPredicted RBP11.8□□□□□ -0.52
PALB2-206ENST00000568219 PCDHA8Q9Y5H6 950 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 PCDH11XQ9BZA7 1347 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 PCDH11YQ9BZA8 1340 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 CFAP73A6NFT4 308 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 EXOC3O60645 756 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 SPAG7O75391 227 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 ANKRD20A3Q5VUR7 823 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 LRIG3Q6UXM1 1119 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 ERMNQ8TAM6 284 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 CYTH2Q99418 400 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 GDF3Q9NR23 364 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 ZBTB21Q9ULJ3 1066 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 SSU72P8A0A1W2PR75 194 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 OPHN1O60890 802 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 AFPP02771 609 aaKnown RBP11.8□□□□□ -0.52
PALB2-206ENST00000568219 NQO1P15559 274 aaKnown RBP11.8□□□□□ -0.52
PALB2-206ENST00000568219 PRDX5P30044 214 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
PALB2-206ENST00000568219 NSMFQ6X4W1 530 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 EYA3Q99504 573 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 ISCA1Q9BUE6 129 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 JCADQ9P266 1359 aa11.8□□□□□ -0.52
PALB2-206ENST00000568219 AGLP35573 1532 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 NKRFO15226 690 aaKnown RBP eCLIP11.79□□□□□ -0.52
PALB2-206ENST00000568219 ORC4O43929 436 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 TOM1O60784 492 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 GNA14O95837 355 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 SHBGP04278 402 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 HSPA9P38646 679 aaKnown RBP11.79□□□□□ -0.52
PALB2-206ENST00000568219 CETN2P41208 172 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
PALB2-206ENST00000568219 ADCY2Q08462 1091 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 CFAP157Q5JU67 520 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 TMEM154Q6P9G4 183 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
PALB2-206ENST00000568219 YTHDF3Q7Z739 585 aaKnown RBP11.79□□□□□ -0.52
PALB2-206ENST00000568219 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 P3H4Q92791 437 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 CCSER1Q9C0I3 900 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 SEMA4AQ9H3S1 761 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 DDX25Q9UHL0 483 aaKnown RBP11.79□□□□□ -0.52
PALB2-206ENST00000568219 SCOCQ9UIL1 159 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 FRMD4BQ9Y2L6 1034 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 IKBKGQ9Y6K9 419 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 ABCA9Q8IUA7 1624 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 SLC16A2P36021 539 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 EVX2Q03828 476 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 GUF1Q8N442 669 aaKnown RBP11.79□□□□□ -0.52
PALB2-206ENST00000568219 CHD1O14646 1710 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 FRMPD1Q5SYB0 1578 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 TMEM120BA0PK00 339 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 A8MUI8 341 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 RASSF9O75901 435 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 MRPL12P52815 198 aaKnown RBP11.79□□□□□ -0.52
PALB2-206ENST00000568219 DIXDC1Q155Q3 683 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 SPATA21Q7Z572 469 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 ERICH1Q86X53 443 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 DYDC2Q96IM9 177 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 KBTBD4Q9NVX7 518 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 ARAP3Q8WWN8 1544 aa11.79□□□□□ -0.52
PALB2-206ENST00000568219 CALUO43852 315 aaPredicted RBP11.78□□□□□ -0.52
PALB2-206ENST00000568219 GNAT1P11488 350 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 COASYQ13057 564 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 PRR16Q569H4 304 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 FYB2Q5VWT5 728 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 SEPT14Q6ZU15 432 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 APBB1IPQ7Z5R6 666 aaPredicted RBP11.78□□□□□ -0.52
PALB2-206ENST00000568219 CROCCP2Q86T23 111 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 CFAP61Q8NHU2 1237 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 LRRC8CQ8TDW0 803 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 TATDN2Q93075 761 aa11.78□□□□□ -0.52
PALB2-206ENST00000568219 IQCGQ9H095 443 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms