RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 INHBEP58166 350 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 AKAP17AQ02040 695 aaKnown RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 SREBF2Q12772 1141 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 PABPC4Q13310 644 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMG1-214ENST00000568038 CUL4AQ13619 759 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 CCDC174Q6PII3 467 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 ANKRD23Q86SG2 305 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 DTWD1Q8N5C7 304 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 PRPF38AQ8NAV1 312 aaKnown RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 NSUN7Q8NE18 718 aaKnown RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 TP53INP1Q96A56 240 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 ATG4CQ96DT6 458 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 RRP36Q96EU6 259 aaKnown RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 PIGSQ96S52 555 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 P2RX7Q99572 595 aaKnown RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 SPZ1Q9BXG8 430 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 ASCC2Q9H1I8 757 aaPredicted RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 RIOX1Q9H6W3 641 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 JMJD4Q9H9V9 463 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 HOXC10Q9NYD6 342 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 ORC3Q9UBD5 711 aaPredicted RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 PPP1R9AQ9ULJ8 1098 aa8.93□□□□□ -0.98
SMG1-214ENST00000568038 CTDP1Q9Y5B0 961 aaPredicted RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 BAZ2BQ9UIF8 2168 aaKnown RBP8.93□□□□□ -0.98
SMG1-214ENST00000568038 LOC285556D6RIA3 1793 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 VWA5AO00534 786 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 PRPF3O43395 683 aaKnown RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 PEX10O60683 326 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 ZBED4O75132 1171 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 CYP2C8P10632 490 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 SMARCA1P28370 1054 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 TM4SF4P48230 202 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 CDC37Q16543 378 aaPredicted RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 QRICH1Q2TAL8 776 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 TTC39BQ5VTQ0 682 aaPredicted RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 OTUD7BQ6GQQ9 843 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 CPXCR1Q8N123 301 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 LLPHQ9BRT6 129 aaKnown RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 RAVER2Q9HCJ3 691 aaKnown RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 SEC63Q9UGP8 760 aaKnown RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 SMC3Q9UQE7 1217 aa8.92□□□□□ -0.98
SMG1-214ENST00000568038 FNDC3AQ9Y2H6 1198 aaKnown RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.92□□□□□ -0.98
SMG1-214ENST00000568038 PNMA6FA0A0J9YX94 578 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 ZBTB5O15062 677 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
SMG1-214ENST00000568038 FDPSP14324 419 aaKnown RBP8.91□□□□□ -0.98
SMG1-214ENST00000568038 TAL1P17542 331 aaPredicted RBP8.91□□□□□ -0.98
SMG1-214ENST00000568038 GJB2P29033 226 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 HERVK_113P62684 666 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 PLS1Q14651 629 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 TAF1CQ15572 869 aaPredicted RBP8.91□□□□□ -0.98
SMG1-214ENST00000568038 PKN1Q16512 942 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 FAM184AQ8NB25 1140 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 SMARCC2Q8TAQ2 1214 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 SMCR8Q8TEV9 937 aaPredicted RBP8.91□□□□□ -0.98
SMG1-214ENST00000568038 WFDC12Q8WWY7 111 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 MTMR8Q96EF0 704 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 AIFM3Q96NN9 605 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 PAGR1Q9BTK6 254 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 RNF26Q9BY78 433 aaPredicted RBP8.91□□□□□ -0.98
SMG1-214ENST00000568038 TRIM33Q9UPN9 1127 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 SLC45A1Q9Y2W3 748 aa8.91□□□□□ -0.98
SMG1-214ENST00000568038 MYPNQ86TC9 1320 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 PPP1R11O60927 126 aaPredicted RBP8.9□□□□□ -0.98
SMG1-214ENST00000568038 DEXIO95424 95 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 SCG2P13521 617 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 SOX18P35713 384 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 MAP2K2P36507 400 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 SCNN1AP37088 669 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 HMGN5P82970 282 aaKnown RBP8.9□□□□□ -0.98
SMG1-214ENST00000568038 USH1GQ495M9 461 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 PRSS36Q5K4E3 855 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 COL13A1Q5TAT6 717 aaPredicted RBP8.9□□□□□ -0.98
SMG1-214ENST00000568038 HEATR3Q7Z4Q2 680 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 ATCAYQ86WG3 371 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 ANKRD13CQ8N6S4 541 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 COA7Q96BR5 231 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 INTS4Q96HW7 963 aaKnown RBP8.9□□□□□ -0.98
SMG1-214ENST00000568038 PARK7Q99497 189 aaKnown RBP8.9□□□□□ -0.98
SMG1-214ENST00000568038 ALG1Q9BT22 464 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 RANBP17Q9H2T7 1088 aaKnown RBP8.9□□□□□ -0.98
SMG1-214ENST00000568038 SLC38A10Q9HBR0 1119 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 ZFYVE28Q9HCC9 887 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 TXNRD2Q9NNW7 524 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 BTBD7Q9P203 1132 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 RBPJLQ9UBG7 517 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 CCPG1Q9ULG6 757 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 ADAMTS5Q9UNA0 930 aa8.9□□□□□ -0.98
SMG1-214ENST00000568038 ZNF536O15090 1300 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 STK36Q9NRP7 1315 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 SCO2A0A1W2PP80 73 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 CA12O43570 354 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 CNMDO75829 334 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 ICAM1P05362 532 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 ALAS1P13196 640 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 GUCY1B3Q02153 619 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 HYAL2Q12891 473 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 TMEM132BQ14DG7 1078 aa8.89□□□□□ -0.99
SMG1-214ENST00000568038 PFKFB3Q16875 520 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms