RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 PFKMP08237 780 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 ARP10275 920 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
LINC01228-201ENST00000567966 BFSP2Q13515 415 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 MFSD10Q14728 455 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 TCTN1Q2MV58 587 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
LINC01228-201ENST00000567966 MCTP1Q6DN14 999 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 CYFIP1Q7L576 1253 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 PPM1EQ8WY54 764 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 SEPT1Q8WYJ6 367 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 SLC5A5Q92911 643 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 WNT8BQ93098 351 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 SPATA33Q96N06 139 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 FTOQ9C0B1 505 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01228-201ENST00000567966 SLC28A3Q9HAS3 691 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 GTF2IRD1Q9UHL9 959 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 TELO2Q9Y4R8 837 aa12.48□□□□□ -0.41
LINC01228-201ENST00000567966 NOP56O00567 594 aaKnown RBP12.47□□□□□ -0.41
LINC01228-201ENST00000567966 MSH4O15457 936 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 DHX15O43143 795 aaKnown RBP12.47□□□□□ -0.41
LINC01228-201ENST00000567966 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 F2P00734 622 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 PSEN1P49768 467 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 NUCB2P80303 420 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 KRT76Q01546 638 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 ZNF746Q6NUN9 644 aaPredicted RBP12.47□□□□□ -0.41
LINC01228-201ENST00000567966 RDM1Q8NG50 284 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
LINC01228-201ENST00000567966 JPH1Q9HDC5 661 aaPredicted RBP12.47□□□□□ -0.41
LINC01228-201ENST00000567966 KCNMB3Q9NPA1 279 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 TCEAL9Q9UHQ7 104 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 PCDHA11Q9Y5I1 949 aa12.47□□□□□ -0.41
LINC01228-201ENST00000567966 RFXAPO00287 272 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 LAD1O00515 517 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 ATG7O95352 703 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 TDP2O95551 362 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 BMP15O95972 392 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 CKBP12277 381 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 IGFBP4P22692 258 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 SFNP31947 248 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 RFC2P35250 354 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 CLCN6P51797 869 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 FOSBP53539 338 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 CCDC85BQ15834 202 aaPredicted RBP12.46□□□□□ -0.41
LINC01228-201ENST00000567966 TRIM71Q2Q1W2 868 aaKnown RBP12.46□□□□□ -0.41
LINC01228-201ENST00000567966 TRAF7Q6Q0C0 670 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 LRRC8DQ7L1W4 858 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 TMCO2Q7Z6W1 182 aaPredicted RBP12.46□□□□□ -0.41
LINC01228-201ENST00000567966 SMAP1Q8IYB5 467 aaPredicted RBP12.46□□□□□ -0.41
LINC01228-201ENST00000567966 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 C7orf31Q8N865 590 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 ETNPPLQ8TBG4 499 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
LINC01228-201ENST00000567966 GBP4Q96PP9 640 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 GPR20Q99678 358 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 C16orf70Q9BSU1 422 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 SLC9A2Q9UBY0 812 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
LINC01228-201ENST00000567966 CHD7Q9P2D1 2997 aa12.46□□□□□ -0.42
LINC01228-201ENST00000567966 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
LINC01228-201ENST00000567966 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 MARCH6O60337 910 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 NEMFO60524 1076 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 GAS7O60861 476 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 NBNO60934 754 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 PSMD10O75832 226 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 CA3P07451 260 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 ACTN1P12814 892 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 SELPP16109 830 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 SLC26A2P50443 739 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 ITGB3BPQ13352 177 aaPredicted RBP12.45□□□□□ -0.42
LINC01228-201ENST00000567966 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 PPP2R2DQ66LE6 453 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 AFAP1L1Q8TED9 768 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 MTMR9Q96QG7 549 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 KATNAL1Q9BW62 490 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 CERS4Q9HA82 394 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 REV3LO60673 3130 aa12.45□□□□□ -0.42
LINC01228-201ENST00000567966 GSTTP1A0A1W2PQM5 241 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 EPOPA6NHQ4 379 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 MCM4P33991 863 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 TOB1P50616 345 aaPredicted RBP12.44□□□□□ -0.42
LINC01228-201ENST00000567966 JAK3P52333 1124 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 ACTR2P61160 394 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 DEFB103AP81534 67 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 RBL2Q08999 1139 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 PTK7Q13308 1070 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 PDIA5Q14554 519 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 MBTPS1Q14703 1052 aa12.44□□□□□ -0.42
LINC01228-201ENST00000567966 CALCRLQ16602 461 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms