RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 ZNF302Q9NR11 478 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
GTF3C1-208ENST00000567843 TRANK1O15050 2925 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 NID2Q14112 1375 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 ENPP3O14638 875 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 ATG7O95352 703 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 ATP4AP20648 1035 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 KLRC1P26715 233 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 FAM160B1Q5W0V3 765 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 MIS18BP1Q6P0N0 1132 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 MTHFD1LQ6UB35 978 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 NIPA1Q7RTP0 329 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 RPAINQ86UA6 219 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 CKAP2LQ8IYA6 745 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 ADAMTS19Q8TE59 1207 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 APBB2Q92870 758 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 MICAL3Q7RTP6 2002 aa13.88□□□□□ -0.19
GTF3C1-208ENST00000567843 MYO7AQ13402 2215 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 IGKV6D-21A0A0A0MT36 114 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 CPLX1O14810 134 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 EDIL3O43854 480 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 CSPG5O95196 566 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 EVCP57679 992 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 TMEM266Q2M3C6 531 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 EPC2Q52LR7 807 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 TEX2Q8IWB9 1127 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 CCDC148Q8NFR7 591 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 SP7Q8TDD2 431 aaPredicted RBP13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 ATP8B4Q8TF62 1192 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 CDHR5Q9HBB8 845 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 TCEAL9Q9UHQ7 104 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 PCDHA2Q9Y5H9 948 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 TRPV2Q9Y5S1 764 aa13.87□□□□□ -0.19
GTF3C1-208ENST00000567843 M0QZ92 97 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 CHMP2AO43633 222 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 IER5Q5VY09 327 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 TSHZ1Q6ZSZ6 1077 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 RTN4RL1Q86UN2 441 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 TRIM22Q8IYM9 498 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 BICD2Q8TD16 824 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 IL17RAQ96F46 866 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 CELF4Q9BZC1 486 aaKnown RBP13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 TBC1D22BQ9NU19 505 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 GABBR1Q9UBS5 961 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 PADI3Q9ULW8 664 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 SAMM50Q9Y512 469 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 REV3LO60673 3130 aa13.86□□□□□ -0.19
GTF3C1-208ENST00000567843 TCF20Q9UGU0 1960 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 SMIM35A0A1B0GVV1 85 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 MSH4O15457 936 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 HBP1O60381 514 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 BMP1P13497 986 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 KRT76Q01546 638 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 GPM6BQ13491 265 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 MCTP2Q6DN12 878 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 TMEM192Q8IY95 271 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 KIAA0319LQ8IZA0 1049 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 TNPO1Q92973 898 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 HLA-CQ95604 372 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 LENG9Q96B70 501 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 ZNF274Q96GC6 653 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 ZNF668Q96K58 619 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 TM6SF1Q9BZW5 370 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 KCNJ14Q9UNX9 436 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
GTF3C1-208ENST00000567843 TNFRSF10AO00220 468 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 TDP2O95551 362 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 PSAPP07602 524 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 CIITAP33076 1130 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 CTNNB1P35222 781 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 GATMP50440 423 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 SLC26A2P50443 739 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 PAK2Q13177 524 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 PAN2Q504Q3 1202 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 ZNF484Q5JVG2 852 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 ZNF746Q6NUN9 644 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 METTL13Q8N6R0 699 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 TMX1Q9H3N1 280 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 GJB4Q9NTQ9 266 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 PCDHA4Q9UN74 947 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 NOC2LQ9Y3T9 749 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 PCDHA10Q9Y5I2 948 aa13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 COL4A4P53420 1690 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-208ENST00000567843 ZBTB42B2RXF5 422 aa13.83□□□□□ -0.2
GTF3C1-208ENST00000567843 EPB41L2O43491 1005 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-208ENST00000567843 DEXIO95424 95 aa13.83□□□□□ -0.2
GTF3C1-208ENST00000567843 VTNP04004 478 aa13.83□□□□□ -0.2
GTF3C1-208ENST00000567843 SCRN1Q12765 414 aa13.83□□□□□ -0.2
GTF3C1-208ENST00000567843 BTG3Q14201 252 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-208ENST00000567843 UGCGQ16739 394 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms