RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 RSPH3Q86UC2 560 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 TRAPPC12Q8WVT3 735 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 DNAJB3Q8WWF6 145 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 SEPT8Q92599 483 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 APBB2Q92870 758 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 RIT2Q99578 217 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 ZNF302Q9NR11 478 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 KCNJ14Q9UNX9 436 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 WDR81Q562E7 1941 aa18.78■□□□□ 0.6
PKD1-233ENST00000567355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.77■□□□□ 0.6
PKD1-233ENST00000567355 LCHNA4D1U4 455 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 HBP1O60381 514 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 FDPSP14324 419 aaKnown RBP18.77■□□□□ 0.6
PKD1-233ENST00000567355 HTRA4P83105 476 aaPredicted RBP18.77■□□□□ 0.6
PKD1-233ENST00000567355 LPIN1Q14693 890 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 C8orf34Q49A92 452 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 MTHFD1LQ6UB35 978 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 B3GNT9Q6UX72 402 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 GAS2L1Q99501 681 aaPredicted RBP18.77■□□□□ 0.6
PKD1-233ENST00000567355 RAD9AQ99638 391 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 IFIH1Q9BYX4 1025 aaKnown RBP18.77■□□□□ 0.6
PKD1-233ENST00000567355 PCDHA10Q9Y5I2 948 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 COL1A2P08123 1366 aa18.77■□□□□ 0.6
PKD1-233ENST00000567355 IGSF9BQ9UPX0 1349 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 COL4A6Q14031 1691 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 SMIM35A0A1B0GVV1 85 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 BACH1O14867 736 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 DTNBO60941 627 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 TDP2O95551 362 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 POU3F3P20264 500 aaPredicted RBP18.76■□□□□ 0.59
PKD1-233ENST00000567355 NEK4P51957 841 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 MRPS6P82932 125 aaKnown RBP18.76■□□□□ 0.59
PKD1-233ENST00000567355 FBXO47Q5MNV8 452 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 PDXDC2PQ6P474 469 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.76■□□□□ 0.59
PKD1-233ENST00000567355 NECAB1Q8N987 351 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 GJB4Q9NTQ9 266 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 CDY2AQ9Y6F7 541 aa18.76■□□□□ 0.59
PKD1-233ENST00000567355 EPOPA6NHQ4 379 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 PSMD10O75832 226 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 AMHP03971 560 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 PSAPP07602 524 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 ST3GAL1Q11201 340 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 NONOQ15233 471 aaKnown RBP eCLIP18.75■□□□□ 0.59
PKD1-233ENST00000567355 ZNF484Q5JVG2 852 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 KRT25Q7Z3Z0 450 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 SPRED2Q7Z698 418 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 ETNPPLQ8TBG4 499 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 SP7Q8TDD2 431 aaPredicted RBP18.75■□□□□ 0.59
PKD1-233ENST00000567355 TOP1MTQ969P6 601 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 SQORQ9Y6N5 450 aa18.75■□□□□ 0.59
PKD1-233ENST00000567355 KDM3AQ9Y4C1 1321 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 MYH9P35579 1960 aaKnown RBP18.74■□□□□ 0.59
PKD1-233ENST00000567355 WDR64B1ANS9 1081 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 GHRP10912 638 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 KLRC1P26715 233 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 IER5Q5VY09 327 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 TSHZ1Q6ZSZ6 1077 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 NME8Q8N427 588 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 NSUN7Q8NE18 718 aaKnown RBP18.74■□□□□ 0.59
PKD1-233ENST00000567355 BBXQ8WY36 941 aaPredicted RBP18.74■□□□□ 0.59
PKD1-233ENST00000567355 KIF2CQ99661 725 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 ZBED2Q9BTP6 218 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 FAM49AQ9H0Q0 323 aaPredicted RBP18.74■□□□□ 0.59
PKD1-233ENST00000567355 UNC45AQ9H3U1 944 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 ORC3Q9UBD5 711 aaPredicted RBP18.74■□□□□ 0.59
PKD1-233ENST00000567355 MYO9BQ13459 2157 aa18.74■□□□□ 0.59
PKD1-233ENST00000567355 LINC01553A4QN01 128 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 ZNF862O60290 1169 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 C22orf31O95567 290 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 XBP1P17861 261 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 SFNP31947 248 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 INF2Q27J81 1249 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 LRCH2Q5VUJ6 765 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 KIAA0319LQ8IZA0 1049 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 MYOCDQ8IZQ8 938 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 OXER1Q8TDS5 423 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 WASF1Q92558 559 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 TNFRSF25Q93038 417 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 GJA10Q969M2 543 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 TEKT3Q9BXF9 490 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 AGO3Q9H9G7 860 aaKnown RBP18.73■□□□□ 0.59
PKD1-233ENST00000567355 CERS4Q9HA82 394 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 DISC1Q9NRI5 854 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 GABBR1Q9UBS5 961 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 INSL6Q9Y581 213 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 TRPV2Q9Y5S1 764 aa18.73■□□□□ 0.59
PKD1-233ENST00000567355 COL4A4P53420 1690 aaPredicted RBP18.73■□□□□ 0.59
PKD1-233ENST00000567355 RFXAPO00287 272 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 SLC37A4O43826 429 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 LPXNO60711 386 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 GAS7O60861 476 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 JAK3P52333 1124 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 ERVK-21P61565 698 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 EARS2Q5JPH6 523 aaKnown RBP18.72■□□□□ 0.59
PKD1-233ENST00000567355 PPP4R3AQ6IN85 833 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 RDM1Q8NG50 284 aa18.72■□□□□ 0.59
PKD1-233ENST00000567355 CELF4Q9BZC1 486 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms