RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 ATP8B4Q8TF62 1192 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 LEO1Q8WVC0 666 aaPredicted RBP9.17□□□□□ -0.94
CDH13-208ENST00000566333 GLG1Q92896 1179 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 ATP6V0A1Q93050 837 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 DYDC2Q96IM9 177 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 CEP89Q96ST8 783 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 SENP6Q9GZR1 1112 aaPredicted RBP9.17□□□□□ -0.94
CDH13-208ENST00000566333 CSRNP2Q9H175 543 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 SMARCAD1Q9H4L7 1026 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 AZI2Q9H6S1 392 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 GTF2IRD1Q9UHL9 959 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 SRPRBQ9Y5M8 271 aaKnown RBP9.17□□□□□ -0.94
CDH13-208ENST00000566333 MICAL3Q7RTP6 2002 aa9.17□□□□□ -0.94
CDH13-208ENST00000566333 PTPRSQ13332 1948 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 ARVCFO00192 962 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 B4GALT4O60513 344 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 PPP6R2O75170 966 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 LYPLA2O95372 231 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 P4HBP07237 508 aaKnown RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 RPA1P27694 616 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 QARSP47897 775 aaKnown RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 RTP1P59025 263 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 PSMC5P62195 406 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 CTTNQ14247 550 aaKnown RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 PDIA5Q14554 519 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 TRIM60Q495X7 471 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 HYIQ5T013 277 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 HAUS3Q68CZ6 603 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 GDF6Q6KF10 455 aaPredicted RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 ANO5Q75V66 913 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 ANKRD33Q7Z3H0 272 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 CATSPER3Q86XQ3 398 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 KCNG4Q8TDN1 519 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 SNX29Q8TEQ0 813 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 LMBR1Q8WVP7 490 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 TNPO1Q92973 898 aaKnown RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 WNT8BQ93098 351 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 ZBTB10Q96DT7 871 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 AK8Q96MA6 479 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 POLR3CQ9BUI4 534 aaPredicted RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 TUFT1Q9NNX1 390 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 TRMT13Q9NUP7 481 aaKnown RBP9.16□□□□□ -0.94
CDH13-208ENST00000566333 HDAC6Q9UBN7 1215 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 LRWD1Q9UFC0 647 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 RCOR1Q9UKL0 485 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 ATP6V1DQ9Y5K8 247 aa9.16□□□□□ -0.94
CDH13-208ENST00000566333 LAMA3Q16787 3333 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 COL1A2P08123 1366 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 A0A087X0B3 334 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 MBLAC1A4D2B0 266 aaPredicted RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 ZBTB39O15060 712 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 SLITRK3O94933 977 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 CD4P01730 458 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 INSRRP14616 1297 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 NCLP19338 710 aaKnown RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 LONP1P36776 959 aaKnown RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 ZNF200P98182 395 aaPredicted RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 PTPN11Q06124 597 aaPredicted RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 PPFIA1Q13136 1202 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 GRB10Q13322 594 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 TARBP2Q15633 366 aaKnown RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 GRIK4Q16099 956 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 TMEM119Q4V9L6 283 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 SPECC1Q5M775 1068 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 MARCH8Q5T0T0 291 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 PLA2G4FQ68DD2 849 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 SHC4Q6S5L8 630 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 KCNK18Q7Z418 384 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 C4orf19Q8IY42 314 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 ZNF579Q8NAF0 562 aaKnown RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 TRAPPC12Q8WVT3 735 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 BBXQ8WY36 941 aaPredicted RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 DHX38Q92620 1227 aaKnown RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 SYMPKQ92797 1274 aaKnown RBP9.15□□□□□ -0.94
CDH13-208ENST00000566333 EPSTI1Q96J88 318 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 FAM167AQ96KS9 214 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 PNMA5Q96PV4 448 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 RAB34Q9BZG1 259 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 TRPV6Q9H1D0 765 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 ZSWIM4Q9H7M6 989 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 SETD4Q9NVD3 440 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 PCDH10Q9P2E7 1040 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 CFAP45Q9UL16 551 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 TRPC6Q9Y210 931 aa9.15□□□□□ -0.94
CDH13-208ENST00000566333 NRCAMQ92823 1304 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 KDM3AQ9Y4C1 1321 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 RBAK-RBAKDNI3L0D1 243 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 HBP1O60381 514 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 PQBP1O60828 265 aaKnown RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 CUTAO60888 179 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 C22orf31O95567 290 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 MUTP22033 750 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 YWHABP31946 246 aaKnown RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 CCT6AP40227 531 aaKnown RBP9.14□□□□□ -0.95
CDH13-208ENST00000566333 RGS19P49795 217 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 CHMP4BP1P59074 171 aa9.14□□□□□ -0.95
CDH13-208ENST00000566333 TLE2Q04725 743 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms