RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 CATSPER3Q86XQ3 398 aa18.67■□□□□ 0.58
RNF40-207ENST00000565931 CKAP2LQ8IYA6 745 aa18.67■□□□□ 0.58
RNF40-207ENST00000565931 C7orf31Q8N865 590 aa18.67■□□□□ 0.58
RNF40-207ENST00000565931 SNX29Q8TEQ0 813 aa18.67■□□□□ 0.58
RNF40-207ENST00000565931 BBXQ8WY36 941 aaPredicted RBP18.67■□□□□ 0.58
RNF40-207ENST00000565931 FAM167AQ96KS9 214 aa18.67■□□□□ 0.58
RNF40-207ENST00000565931 SCAND2PQ9GZW5 306 aaPredicted RBP18.67■□□□□ 0.58
RNF40-207ENST00000565931 NRBP2Q9NSY0 501 aa18.67■□□□□ 0.58
RNF40-207ENST00000565931 INSRRP14616 1297 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 HOXC8P31273 242 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 CCT6AP40227 531 aaKnown RBP18.66■□□□□ 0.58
RNF40-207ENST00000565931 HIC1Q14526 733 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 XKR3Q5GH77 459 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 FAM47CQ5HY64 1035 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 AXDND1Q5T1B0 1012 aaPredicted RBP18.66■□□□□ 0.58
RNF40-207ENST00000565931 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
RNF40-207ENST00000565931 SPATA32Q96LK8 384 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 GTF2IRD1Q9UHL9 959 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 PCDHA7Q9UN72 937 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 TRPC6Q9Y210 931 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 DOCK5Q9H7D0 1870 aa18.66■□□□□ 0.58
RNF40-207ENST00000565931 CUTAO60888 179 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 MUTP22033 750 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 UBA7P41226 1012 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 RTP1P59025 263 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 PPFIA1Q13136 1202 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 ECM1Q16610 540 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 TRIM60Q495X7 471 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 SPECC1Q5M775 1068 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 GDF6Q6KF10 455 aaPredicted RBP18.65■□□□□ 0.58
RNF40-207ENST00000565931 USP49Q70CQ1 688 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 TRMT1LQ7Z2T5 733 aaKnown RBP18.65■□□□□ 0.58
RNF40-207ENST00000565931 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 CABP7Q86V35 215 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 FAM126BQ8IXS8 530 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 ZNF579Q8NAF0 562 aaKnown RBP18.65■□□□□ 0.58
RNF40-207ENST00000565931 TOX2Q96NM4 488 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 NIFKQ9BYG3 293 aaKnown RBP18.65■□□□□ 0.58
RNF40-207ENST00000565931 SETD4Q9NVD3 440 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 NRCAMQ92823 1304 aa18.65■□□□□ 0.58
RNF40-207ENST00000565931 C17orf102A2RUQ5 167 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 DDX11L8A8MPP1 907 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 ME1P48163 572 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 ADAM17P78536 824 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 TLE2Q04725 743 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 GRIK4Q16099 956 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 ZNF484Q5JVG2 852 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 HYIQ5T013 277 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 ANO5Q75V66 913 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 EPSTI1Q96J88 318 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 PNMA5Q96PV4 448 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 CCSER1Q9C0I3 900 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 GDPD2Q9HCC8 539 aa18.64■□□□□ 0.57
RNF40-207ENST00000565931 BRCA2P51587 3418 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 A0A087WWV3 80 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 TMEM150BA6NC51 233 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 RRN3P2A6NIE6 340 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 ZBTB42B2RXF5 422 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 ZBTB39O15060 712 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 SLC26A4O43511 780 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 PQBP1O60828 265 aaKnown RBP18.63■□□□□ 0.57
RNF40-207ENST00000565931 CD4P01730 458 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
RNF40-207ENST00000565931 YWHABP31946 246 aaKnown RBP18.63■□□□□ 0.57
RNF40-207ENST00000565931 RGS19P49795 217 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 ZNF200P98182 395 aaPredicted RBP18.63■□□□□ 0.57
RNF40-207ENST00000565931 TARBP2Q15633 366 aaKnown RBP18.63■□□□□ 0.57
RNF40-207ENST00000565931 POTEGQ6S5H5 508 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 LMBR1Q8WVP7 490 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 SYMPKQ92797 1274 aaKnown RBP18.63■□□□□ 0.57
RNF40-207ENST00000565931 NACC1Q96RE7 527 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 TRPV6Q9H1D0 765 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 ANKEF1Q9NU02 776 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 TRMT13Q9NUP7 481 aaKnown RBP18.63■□□□□ 0.57
RNF40-207ENST00000565931 SEPT9Q9UHD8 586 aaPredicted RBP18.63■□□□□ 0.57
RNF40-207ENST00000565931 KIAA1024Q9UPX6 916 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 ATP11BQ9Y2G3 1177 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 MROH7Q68CQ1 1323 aa18.63■□□□□ 0.57
RNF40-207ENST00000565931 B4GALT4O60513 344 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 CAPN15O75808 1086 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 GNAT1P11488 350 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 IGBP1P78318 339 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 GRB10Q13322 594 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 MARCH8Q5T0T0 291 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 PLA2G4FQ68DD2 849 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 SHC4Q6S5L8 630 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 OTUD6AQ7L8S5 288 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 CEP89Q96ST8 783 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 HTATIP2Q9BUP3 242 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 DDX19AQ9NUU7 478 aaKnown RBP18.62■□□□□ 0.57
RNF40-207ENST00000565931 COL1A2P08123 1366 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 SCN10AQ9Y5Y9 1956 aa18.62■□□□□ 0.57
RNF40-207ENST00000565931 KDM3AQ9Y4C1 1321 aa18.61■□□□□ 0.57
RNF40-207ENST00000565931 MBLAC1A4D2B0 266 aaPredicted RBP18.61■□□□□ 0.57
RNF40-207ENST00000565931 DCDC2CA8MYV0 355 aa18.61■□□□□ 0.57
RNF40-207ENST00000565931 TLR3O15455 904 aaKnown RBP18.61■□□□□ 0.57
RNF40-207ENST00000565931 TREHO43280 583 aa18.61■□□□□ 0.57
RNF40-207ENST00000565931 NPEPPSP55786 919 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms