RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 PCDHB6Q9Y5E3 794 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 MYH9P35579 1960 aaKnown RBP14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 IGSF9BQ9UPX0 1349 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 SYN1P17600 705 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 PPIGQ13427 754 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 NCAPH2Q6IBW4 605 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 C4orf19Q8IY42 314 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 KCTD17Q8N5Z5 321 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 LMBR1Q8WVP7 490 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 GJA10Q969M2 543 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 JPH2Q9BR39 696 aaPredicted RBP14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 NIFKQ9BYG3 293 aaKnown RBP14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 TMEM60Q9H2L4 133 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 TUBE1Q9UJT0 475 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 MTMR6Q9Y217 621 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
SHCBP1-204ENST00000565887 A0A1W2PPC1 479 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 EML1O00423 815 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 TREHO43280 583 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 LYPLA2O95372 231 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 OATP04181 439 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 PFKMP08237 780 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 CYP2C9P11712 490 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 ATP4AP20648 1035 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 TMOD1P28289 359 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 TECP42680 631 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 CDC42EP1Q00587 391 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 FPGSQ05932 587 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 SPIRE1Q08AE8 756 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 ATL3Q6DD88 541 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 BADQ92934 168 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 ZNF396Q96N95 335 aaPredicted RBP14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 GDF15Q99988 308 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 HSD17B14Q9BPX1 270 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 EIF2AK1Q9BQI3 630 aaKnown RBP14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 POLR3CQ9BUI4 534 aaPredicted RBP14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 TUFT1Q9NNX1 390 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 CEP290O15078 2479 aa14.12□□□□□ -0.15
SHCBP1-204ENST00000565887 SMIM35A0A1B0GVV1 85 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 DDX11L8A8MPP1 907 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 WNT7AO00755 349 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 SLITRK3O94933 977 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 ZSCAN22P10073 491 aaPredicted RBP14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 CKBP12277 381 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 SELPP16109 830 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 KLRC1P26715 233 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 ATP2C1P98194 919 aaPredicted RBP14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 PRKCEQ02156 737 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 RESTQ13127 1097 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 IER5Q5VY09 327 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 HAUS3Q68CZ6 603 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 MTHFD1LQ6UB35 978 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 FERMT3Q86UX7 667 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 CTAGE1Q96RT6 745 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 LRWD1Q9UFC0 647 aa14.11□□□□□ -0.15
SHCBP1-204ENST00000565887 M0QZ92 97 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 SLC26A4O43511 780 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 ZNF862O60290 1169 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 IQCF3P0C7M6 154 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 RPA1P27694 616 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 CYP2C18P33260 490 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 THPOP40225 353 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 DNM2P50570 870 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 IGBP1P78318 339 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 ZNF200P98182 395 aaPredicted RBP14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 MDM2Q00987 491 aaPredicted RBP14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 MARCH8Q5T0T0 291 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 TPH2Q8IWU9 490 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 IGSF22Q8N9C0 903 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 AK8Q96MA6 479 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 PPP1R12CQ9BZL4 782 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 UBE2OQ9C0C9 1292 aaKnown RBP14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 ANKEF1Q9NU02 776 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 ATP6V1DQ9Y5K8 247 aa14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 MORC2Q9Y6X9 1032 aaPredicted RBP14.1□□□□□ -0.15
SHCBP1-204ENST00000565887 RSPH10B2B2RC85 870 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 GAS2O43903 313 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 RSPH10BP0C881 870 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 ITGB8P26012 769 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 TBC1D8BQ0IIM8 1120 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 NBR1Q14596 966 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 SF3A1Q15459 793 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 TARBP2Q15633 366 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 TRIM71Q2Q1W2 868 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 FAM26DQ5JW98 314 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 KRT79Q5XKE5 535 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 LRRC8DQ7L1W4 858 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 SPRYD3Q8NCJ5 442 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 BANK1Q8NDB2 785 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 PPP1R13LQ8WUF5 828 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 DYDC2Q96IM9 177 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 NACC1Q96RE7 527 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 LXNQ9BS40 222 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 MTIF3Q9H2K0 278 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 IL23AQ9NPF7 189 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 RGL1Q9NZL6 768 aa14.09□□□□□ -0.15
SHCBP1-204ENST00000565887 CFAP45Q9UL16 551 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms