RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 EIF3AQ14152 1382 aaKnown RBP5.56□□□□□ -1.52
LINC00561-201ENST00000565815 TECPR2O15040 1411 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 TNS3Q68CZ2 1445 aa5.56□□□□□ -1.52
LINC00561-201ENST00000565815 NUDT19A8MXV4 375 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 SLC27A2O14975 620 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 HYAL3O43820 417 aaPredicted RBP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 SLC9A1P19634 815 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 IGBP1P78318 339 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 PI4K2BQ8TCG2 481 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 RC3H2Q9HBD1 1191 aaKnown RBP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 THRAP3Q9Y2W1 955 aaKnown RBP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 COL14A1Q05707 1796 aaKnown RBP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 KIF1BO60333 1816 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 CBX4O00257 560 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 GNAT1P11488 350 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 MECP2P51608 486 aaKnown RBP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 SLC14A2Q15849 920 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 HLA-DQA1Q5Y7H0 255 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 BICRALQ6AI39 1079 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 LZTR1Q8N653 840 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 ARRDC4Q8NCT1 418 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 MISP3Q96FF7 219 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 ORAI2Q96SN7 254 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 CELF4Q9BZC1 486 aaKnown RBP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 DDX56Q9NY93 547 aaKnown RBP5.55□□□□□ -1.52
LINC00561-201ENST00000565815 CTNND2Q9UQB3 1225 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 PLCH1Q4KWH8 1693 aa5.55□□□□□ -1.52
LINC00561-201ENST00000565815 SCO2A0A1W2PP80 73 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ZC3H12DA2A288 527 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ZNF561-AS1K7EIQ3 104 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 TMEM253P0C7T8 217 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ANAPC15P60006 121 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ST5P78524 1137 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 GRIN1Q05586 938 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 PHF19Q5T6S3 580 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 WWC2Q6AWC2 1192 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 SLC23A3Q6PIS1 610 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ARHGAP36Q6ZRI8 547 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ANKRD13AQ8IZ07 590 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 SMC1BQ8NDV3 1235 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 MAPRE3Q9UPY8 281 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 KNDC1Q76NI1 1749 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 MAN2B1O00754 1011 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 SGSM2O43147 1006 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 NPHS1O60500 1241 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 NCLP19338 710 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 POU3F2P20265 443 aaPredicted RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 R3HDM1Q15032 1099 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 BRDTQ58F21 947 aaPredicted RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 RSPO2Q6UXX9 243 aaPredicted RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 KRT28Q7Z3Y7 464 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ATL2Q8NHH9 583 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 CAMKK2Q96RR4 588 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 TNFRSF10DQ9UBN6 386 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 OAS3Q9Y6K5 1087 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 RGPD3A6NKT7 1758 aaPredicted RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 RGPD4Q7Z3J3 1758 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 RREB1Q92766 1687 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 TNS1Q9HBL0 1735 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ABCC11Q96J66 1382 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 RASSF10A6NK89 507 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 SCDO00767 359 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 MYO1BO43795 1136 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 WNT11O96014 354 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 GLI4P10075 376 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 HSP90B1P14625 803 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 MC3RP41968 323 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 IL2P60568 153 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 C1QTNF8P60827 252 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 ADGRF1Q5T601 910 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 INTS5Q6P9B9 1019 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 NLRX1Q86UT6 975 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 PPM1KQ8N3J5 372 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 PDZD8Q8NEN9 1154 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 CLEC4DQ8WXI8 215 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 DDX17Q92841 729 aaKnown RBP5.54□□□□□ -1.52
LINC00561-201ENST00000565815 EMC7Q9NPA0 242 aa5.54□□□□□ -1.52
LINC00561-201ENST00000565815 NAIPQ13075 1403 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 NUP155O75694 1391 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 THSD7AQ9UPZ6 1657 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 A0A1W2PQ27 194 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 A0A1W2PQ45 241 aaPredicted RBP5.53□□□□□ -1.52
LINC00561-201ENST00000565815 A0A1W2PQ64 194 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 A0A1W2PQC6 194 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 A0A1W2PQD8 194 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 A0A1W2PQY0 241 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 F2P00734 622 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 OTOP3Q7RTS5 596 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 NOSTRINQ8IVI9 506 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 STK11IPQ8N1F8 1099 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 Q8N1Y9 231 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 FBXW5Q969U6 566 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 MTMR8Q96EF0 704 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 SEMA4AQ9H3S1 761 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 ANKARQ7Z5J8 1434 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 NRAPQ86VF7 1730 aa5.53□□□□□ -1.52
LINC00561-201ENST00000565815 FMN2Q9NZ56 1722 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms