RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 CPA4Q9UI42 421 aa10.45□□□□□ -0.74
CNEP1R1-206ENST00000565556 KIAA1024Q9UPX6 916 aa10.45□□□□□ -0.74
CNEP1R1-206ENST00000565556 DNM3Q9UQ16 869 aa10.45□□□□□ -0.74
CNEP1R1-206ENST00000565556 DIS3Q9Y2L1 958 aaKnown RBP10.45□□□□□ -0.74
CNEP1R1-206ENST00000565556 ZNF236Q9UL36 1845 aa10.45□□□□□ -0.74
CNEP1R1-206ENST00000565556 EML1O00423 815 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CA12O43570 354 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CHMP2AO43633 222 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 MED24O75448 989 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 RGS20O76081 388 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 SPATA31C1P0DKV0 1188 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CYP2C19P33261 490 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 GRB14Q14449 540 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 ZNF792Q3KQV3 632 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CYP4F22Q6NT55 531 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 ZNF746Q6NUN9 644 aaPredicted RBP10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 REXO1L1PQ8IX06 675 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CCDC47Q96A33 483 aaKnown RBP10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 FGD4Q96M96 766 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 MTRQ99707 1265 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 HSD17B14Q9BPX1 270 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 C7orf25Q9BPX7 421 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 ST7Q9NRC1 585 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 BLOC1S4Q9NUP1 217 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 PKD2L1Q9P0L9 805 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 DACH1Q9UI36 760 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 LOXHD1Q8IVV2 1947 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 LRRC37A2A6NM11 1700 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 POTEB3A0JP26 581 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 WDR64B1ANS9 1081 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 DDX39AO00148 427 aaKnown RBP10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 ATP9AO75110 1047 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 P4HBP07237 508 aaKnown RBP10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 KCNA2P16389 499 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CASQ1P31415 396 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 GRM1Q13255 1194 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 ECM1Q16610 540 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CNNM4Q6P4Q7 775 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 POTEBQ6S5H4 581 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 DPP9Q86TI2 863 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 STAMQ92783 540 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CAPNS2Q96L46 248 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 CARD6Q9BX69 1037 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 MAN1B1Q9UKM7 699 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 PPP2R2CQ9Y2T4 447 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 SAMM50Q9Y512 469 aa10.44□□□□□ -0.74
CNEP1R1-206ENST00000565556 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 STX10O60499 249 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 COBLO75128 1261 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 SLITRK3O94933 977 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 RPN1P04843 607 aaKnown RBP10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 PLA2G4AP47712 749 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 CUL4BQ13620 913 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 MORC3Q14149 939 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 NEDD9Q14511 834 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 MCM6Q14566 821 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 KCNB1Q14721 858 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 CT47A1Q5JQC4 288 aaPredicted RBP10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 ISM2Q6H9L7 571 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 POTEGQ6S5H5 508 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 SEPT14Q6ZU15 432 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 TMEM139Q8IV31 216 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 TPH2Q8IWU9 490 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 MSL3Q8N5Y2 521 aaKnown RBP10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 MLKLQ8NB16 471 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 LRRC15Q8TF66 581 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 DYDC2Q96IM9 177 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 NACC1Q96RE7 527 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 BAG1Q99933 345 aaPredicted RBP10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 TRIM9Q9C026 710 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 JPH1Q9HDC5 661 aaPredicted RBP10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 SLC9A2Q9UBY0 812 aa10.43□□□□□ -0.74
CNEP1R1-206ENST00000565556 PVALEFA0A1B0GWK0 134 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 ERICH4A6NGS2 130 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 DKC1O60832 514 aaKnown RBP eCLIP10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 EYA4O95677 639 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 PLA2G4BP0C869 781 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 CYP4A11Q02928 519 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 PPP2R3AQ06190 1150 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 TBX2Q13207 712 aaPredicted RBP10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 CRHR2Q13324 411 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 MAMDC4Q6UXC1 1216 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 KCNK18Q7Z418 384 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 SYT2Q8N9I0 419 aaPredicted RBP10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 BLZF1Q9H2G9 400 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 ZSWIM4Q9H7M6 989 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 VTA1Q9NP79 307 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 FANCLQ9NW38 375 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 RGL1Q9NZL6 768 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 PCDHA10Q9Y5I2 948 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 MRFAP1Q9Y605 127 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 MCM3APO60318 1980 aa10.42□□□□□ -0.74
CNEP1R1-206ENST00000565556 E9PMD0 336 aa10.41□□□□□ -0.74
CNEP1R1-206ENST00000565556 LYPLA2O95372 231 aa10.41□□□□□ -0.74
CNEP1R1-206ENST00000565556 PSAPP07602 524 aa10.41□□□□□ -0.74
CNEP1R1-206ENST00000565556 QARSP47897 775 aaKnown RBP10.41□□□□□ -0.74
CNEP1R1-206ENST00000565556 GNG11P61952 73 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms