RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 B4E1Z4 1266 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 C22orf46C9J442 243 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
CHD9-215ENST00000565442 FLT3P36888 993 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 DNM2P50570 870 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 AMPD3Q01432 767 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 CFAP100Q494V2 611 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 CT47A1Q5JQC4 288 aaPredicted RBP6.29□□□□□ -1.4
CHD9-215ENST00000565442 PIK3R6Q5UE93 754 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 SLFN13Q68D06 897 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 ZCCHC8Q6NZY4 707 aaKnown RBP6.29□□□□□ -1.4
CHD9-215ENST00000565442 UBE2R2Q712K3 238 aaPredicted RBP6.29□□□□□ -1.4
CHD9-215ENST00000565442 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 RNF180Q86T96 592 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 IGSF22Q8N9C0 903 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 ZCRB1Q8TBF4 217 aaKnown RBP6.29□□□□□ -1.4
CHD9-215ENST00000565442 LEO1Q8WVC0 666 aaPredicted RBP6.29□□□□□ -1.4
CHD9-215ENST00000565442 SEC14L1Q92503 715 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 ZNF341Q9BYN7 854 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 TMEM168Q9H0V1 697 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 CAAP1Q9H8G2 361 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 L2HGDHQ9H9P8 463 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 NGRNQ9NPE2 291 aaKnown RBP6.29□□□□□ -1.4
CHD9-215ENST00000565442 PCDH12Q9NPG4 1184 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 MAPRE3Q9UPY8 281 aa6.29□□□□□ -1.4
CHD9-215ENST00000565442 hCG_2014768A0A024R1R8 64 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 FAM47E-STBD1D6RA91 191 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 ZNF623O75123 536 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 PYGMP11217 842 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 IBSPP21815 317 aaPredicted RBP6.28□□□□□ -1.4
CHD9-215ENST00000565442 TGM1P22735 817 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 SOX5P35711 763 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 STAT5AP42229 794 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 ST5P78524 1137 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 CDCA2Q69YH5 1023 aaPredicted RBP6.28□□□□□ -1.4
CHD9-215ENST00000565442 DDX53Q86TM3 631 aaKnown RBP6.28□□□□□ -1.4
CHD9-215ENST00000565442 KBTBD2Q8IY47 623 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 PPM1KQ8N3J5 372 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 FBXW5Q969U6 566 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 PTPN18Q99952 460 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 FAM126AQ9BYI3 521 aaPredicted RBP6.28□□□□□ -1.4
CHD9-215ENST00000565442 MTFR1LQ9H019 292 aa6.28□□□□□ -1.4
CHD9-215ENST00000565442 CCDC66A2RUB6 948 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 M0R2C6 588 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 GLRX3O76003 335 aaKnown RBP6.27□□□□□ -1.41
CHD9-215ENST00000565442 CKMP06732 381 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 POU3F2P20265 443 aaPredicted RBP6.27□□□□□ -1.41
CHD9-215ENST00000565442 IL13P35225 146 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 SEPT7Q16181 437 aaKnown RBP6.27□□□□□ -1.41
CHD9-215ENST00000565442 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
CHD9-215ENST00000565442 CR1LQ2VPA4 569 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 FAM47CQ5HY64 1035 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 MILR1Q7Z6M3 343 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 AHI1Q8N157 1196 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 WNK4Q96J92 1243 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 CATSPERZQ9NTU4 200 aa6.27□□□□□ -1.41
CHD9-215ENST00000565442 NOP58Q9Y2X3 529 aaKnown RBP6.27□□□□□ -1.41
CHD9-215ENST00000565442 NPIPB8E9PQR5 432 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 H7BY64 318 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 COL6A2P12110 1019 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 SLC6A11P48066 632 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 IGBP1P78318 339 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 NKX3-2P78367 333 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 STRA8Q7Z7C7 330 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 ANKRD13AQ8IZ07 590 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 Q8N1Y9 231 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 CISD2Q8N5K1 135 aaKnown RBP6.26□□□□□ -1.41
CHD9-215ENST00000565442 Q8TCH9 128 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 ZSWIM3Q96MP5 696 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 MEGF9Q9H1U4 602 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 CBLCQ9ULV8 474 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 COA3Q9Y2R0 106 aaPredicted RBP6.26□□□□□ -1.41
CHD9-215ENST00000565442 X6R8D5 127 aa6.26□□□□□ -1.41
CHD9-215ENST00000565442 WNT9AO14904 365 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 GSTA4O15217 222 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 GNAT1P11488 350 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 POU3F3P20264 500 aaPredicted RBP6.25□□□□□ -1.41
CHD9-215ENST00000565442 MLLT6P55198 1093 aaPredicted RBP6.25□□□□□ -1.41
CHD9-215ENST00000565442 INHBEP58166 350 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 ANAPC15P60006 121 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 PURAQ00577 322 aaKnown RBP6.25□□□□□ -1.41
CHD9-215ENST00000565442 STRN3Q13033 797 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 TMEM177Q53S58 311 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 DDX46Q7L014 1031 aaKnown RBP6.25□□□□□ -1.41
CHD9-215ENST00000565442 OVCH1Q7RTY7 1134 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 YIPF4Q9BSR8 244 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 CELF4Q9BZC1 486 aaKnown RBP6.25□□□□□ -1.41
CHD9-215ENST00000565442 BRINP2Q9C0B6 783 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 EPB41L1Q9H4G0 881 aa6.25□□□□□ -1.41
CHD9-215ENST00000565442 B4GALT4O60513 344 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 DGKIO75912 1065 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 NPTXRO95502 500 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 PDE6AP16499 860 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 KRT15P19012 456 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 SPIRE1Q08AE8 756 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 CRY1Q16526 586 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 MROH9Q5TGP6 573 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 C16orf59Q7L2K0 433 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 OSTM1Q86WC4 334 aa6.24□□□□□ -1.41
CHD9-215ENST00000565442 NXPE1Q8N323 547 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms