RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 LRRC15Q8TF66 581 aa17.39■□□□□ 0.37
CDH11-209ENST00000564317 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
CDH11-209ENST00000564317 KATNAL1Q9BW62 490 aa17.39■□□□□ 0.37
CDH11-209ENST00000564317 CCSER1Q9C0I3 900 aa17.39■□□□□ 0.37
CDH11-209ENST00000564317 SENP6Q9GZR1 1112 aaPredicted RBP17.39■□□□□ 0.37
CDH11-209ENST00000564317 C11orf49Q9H6J7 331 aa17.39■□□□□ 0.37
CDH11-209ENST00000564317 ZSWIM4Q9H7M6 989 aa17.39■□□□□ 0.37
CDH11-209ENST00000564317 STARD7Q9NQZ5 370 aa17.39■□□□□ 0.37
CDH11-209ENST00000564317 ZBTB39O15060 712 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 LYPLA2O95372 231 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 SMIM10L2AP0DMW4 78 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 SMIM10L2BP0DMW5 78 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 UBA7P41226 1012 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 SLC26A2P50443 739 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 HIC1Q14526 733 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 ZRSR1Q15695 479 aaKnown RBP17.38■□□□□ 0.37
CDH11-209ENST00000564317 TMEM119Q4V9L6 283 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 HYIQ5T013 277 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 RESP18Q5W5W9 173 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 KCNK18Q7Z418 384 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 C4orf19Q8IY42 314 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 CKAP2LQ8IYA6 745 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 TMEM87AQ8NBN3 555 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 VTI1AQ96AJ9 217 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 PLIN2Q99541 437 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 STK24Q9Y6E0 443 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 BRCA2P51587 3418 aa17.38■□□□□ 0.37
CDH11-209ENST00000564317 WDR81Q562E7 1941 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 A0A087X0B3 334 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 A0A0U1RQG5 324 aaPredicted RBP17.37■□□□□ 0.37
CDH11-209ENST00000564317 ZBTB42B2RXF5 422 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 ITGA7Q13683 1181 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 TPRNQ4KMQ1 711 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 XKR3Q5GH77 459 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 PLA2G4FQ68DD2 849 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 ADALQ6DHV7 355 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 ANO5Q75V66 913 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 SLC43A3Q8NBI5 491 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 BBXQ8WY36 941 aaPredicted RBP17.37■□□□□ 0.37
CDH11-209ENST00000564317 DDX19AQ9NUU7 478 aaKnown RBP17.37■□□□□ 0.37
CDH11-209ENST00000564317 HDAC6Q9UBN7 1215 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 SEPT9Q9UHD8 586 aaPredicted RBP17.37■□□□□ 0.37
CDH11-209ENST00000564317 KIAA1024Q9UPX6 916 aa17.37■□□□□ 0.37
CDH11-209ENST00000564317 DDX11L8A8MPP1 907 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 INSRRP14616 1297 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 PLCG1P19174 1290 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
CDH11-209ENST00000564317 ATN1P54259 1190 aaPredicted RBP17.36■□□□□ 0.37
CDH11-209ENST00000564317 PPFIA1Q13136 1202 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 NECAB2Q7Z6G3 386 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 PIGOQ8TEQ8 1089 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 TRAPPC12Q8WVT3 735 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 FAM167AQ96KS9 214 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 SH2D3AQ9BRG2 576 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 GOLPH3LQ9H4A5 285 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 KDM3AQ9Y4C1 1321 aa17.36■□□□□ 0.37
CDH11-209ENST00000564317 A0A1W2PQ27 194 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 A0A1W2PQ64 194 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 E9PMD0 336 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 ARVCFO00192 962 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 SLC26A4O43511 780 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 HBP1O60381 514 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 DKC1O60832 514 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDH11-209ENST00000564317 GADD45BO75293 160 aaPredicted RBP17.35■□□□□ 0.37
CDH11-209ENST00000564317 MUTP22033 750 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 CMA1P23946 247 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 HOXC8P31273 242 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 NPEPPSP55786 919 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 ZNF200P98182 395 aaPredicted RBP17.35■□□□□ 0.37
CDH11-209ENST00000564317 SNX17Q15036 470 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 GRIK4Q16099 956 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 FAM47CQ5HY64 1035 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 NFRKBQ6P4R8 1299 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 SLC39A5Q6ZMH5 540 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 SESTD1Q86VW0 696 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 C7orf31Q8N865 590 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 LMBR1Q8WVP7 490 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 ZBTB10Q96DT7 871 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 CALML4Q96GE6 196 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 NIFKQ9BYG3 293 aaKnown RBP17.35■□□□□ 0.37
CDH11-209ENST00000564317 SETD4Q9NVD3 440 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 GTF2IRD1Q9UHL9 959 aa17.35■□□□□ 0.37
CDH11-209ENST00000564317 PFKFB1P16118 471 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 TXLNAP40222 546 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 CDK7P50613 346 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 IGBP1P78318 339 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 TARBP2Q15633 366 aaKnown RBP17.34■□□□□ 0.37
CDH11-209ENST00000564317 CSPP1Q1MSJ5 1256 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 MTERF2Q49AM1 385 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 MARCH8Q5T0T0 291 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 GDF6Q6KF10 455 aaPredicted RBP17.34■□□□□ 0.37
CDH11-209ENST00000564317 FSIP1Q8NA03 581 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 RASSF8Q8NHQ8 419 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 CDK5RAP3Q96JB5 506 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 NACC1Q96RE7 527 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 PANK2Q9BZ23 570 aa17.34■□□□□ 0.37
CDH11-209ENST00000564317 NRBP2Q9NSY0 501 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms