RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 PTPROQ16827 1216 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 PUS10Q3MIT2 529 aaKnown RBP19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 PLEKHG4Q58EX7 1191 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 FAM26DQ5JW98 314 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 MARCH8Q5T0T0 291 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 RUFY4Q6ZNE9 571 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 PLA2G4DQ86XP0 818 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 MYOCDQ8IZQ8 938 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 CCDC148Q8NFR7 591 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 RASGRP4Q8TDF6 673 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 PDRG1Q9NUG6 133 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 BRWD1Q9NSI6 2320 aa19.81■□□□□ 0.76
MAP1LC3B-204ENST00000563720 NLRC5Q86WI3 1866 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 GRXCR2A6NFK2 248 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 DHX15O43143 795 aaKnown RBP19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 ATG7O95352 703 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 CCNE2O96020 404 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 AMHP03971 560 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 TAF2Q6P1X5 1199 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 RPAINQ86UA6 219 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 BICD2Q8TD16 824 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 MRPL38Q96DV4 380 aaKnown RBP19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 AZI2Q9H6S1 392 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 SH3GLB2Q9NR46 395 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 TUBE1Q9UJT0 475 aa19.8■□□□□ 0.76
MAP1LC3B-204ENST00000563720 IGKV6D-21A0A0A0MT36 114 aa19.79■□□□□ 0.76
MAP1LC3B-204ENST00000563720 DDX39AO00148 427 aaKnown RBP19.79■□□□□ 0.76
MAP1LC3B-204ENST00000563720 INSRRP14616 1297 aa19.79■□□□□ 0.76
MAP1LC3B-204ENST00000563720 SSRP1Q08945 709 aaKnown RBP19.79■□□□□ 0.76
MAP1LC3B-204ENST00000563720 EP400NLQ6ZTU2 488 aa19.79■□□□□ 0.76
MAP1LC3B-204ENST00000563720 PLPPR4Q7Z2D5 763 aa19.79■□□□□ 0.76
MAP1LC3B-204ENST00000563720 TRIM22Q8IYM9 498 aa19.79■□□□□ 0.76
MAP1LC3B-204ENST00000563720 MUC6Q6W4X9 2439 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 H3BQ06 376 aaPredicted RBP19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 EDIL3O43854 480 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 CHRNA1P02708 482 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 CIITAP33076 1130 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 STAT5BP51692 787 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 STK3Q13188 491 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 PLCB4Q15147 1175 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 TIGD5Q53EQ6 642 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 ABHD15Q6UXT9 468 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 SEPT8Q92599 483 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 ZBTB10Q96DT7 871 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 SAMD11Q96NU1 681 aa19.78■□□□□ 0.76
MAP1LC3B-204ENST00000563720 RRN3P2A6NIE6 340 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 IPO5O00410 1097 aaKnown RBP19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 CPLX1O14810 134 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 DCXO43602 365 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 DEXIO95424 95 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 MRE11P49959 708 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 IGBP1P78318 339 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 SETQ01105 290 aaPredicted RBP19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 MGAT3Q09327 533 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 EPC2Q52LR7 807 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 NEK9Q8TD19 979 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 LENG9Q96B70 501 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 ZNF577Q9BSK1 485 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 TRPC6Q9Y210 931 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 FAM50BQ9Y247 325 aa19.77■□□□□ 0.76
MAP1LC3B-204ENST00000563720 CENPBP07199 599 aaPredicted RBP19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 NLRP5P59047 1200 aa19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 ANAPC15P60006 121 aa19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 HTRA4P83105 476 aaPredicted RBP19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 PRR16Q569H4 304 aa19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 CCDC60Q8IWA6 550 aaPredicted RBP19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 BANK1Q8NDB2 785 aa19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 DNAJB3Q8WWF6 145 aa19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 AIFM3Q96NN9 605 aa19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 YME1L1Q96TA2 773 aa19.76■□□□□ 0.75
MAP1LC3B-204ENST00000563720 RALGAPA2Q2PPJ7 1873 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 TTC3P53804 2025 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 SLC26A2P50443 739 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 SCRN1Q12765 414 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 GPM6BQ13491 265 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 RSPH3Q86UC2 560 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 SP7Q8TDD2 431 aaPredicted RBP19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 TRAPPC12Q8WVT3 735 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 APBB2Q92870 758 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 TNPO1Q92973 898 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 IL17RAQ96F46 866 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 IFIH1Q9BYX4 1025 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 TBC1D22BQ9NU19 505 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 TPCN1Q9ULQ1 816 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 PCDHA4Q9UN74 947 aa19.75■□□□□ 0.75
MAP1LC3B-204ENST00000563720 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 POTEB3A0JP26 581 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 H3BNC9 293 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 M0R2N6 131 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 BACH1O14867 736 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 GHRP10912 638 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 NPY5RQ15761 445 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 TCEAL5Q5H9L2 206 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 ZNF746Q6NUN9 644 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 CPLX2Q6PUV4 134 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 POTEBQ6S5H4 581 aa19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 PABPC5Q96DU9 382 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 FAM49AQ9H0Q0 323 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-204ENST00000563720 ZNF302Q9NR11 478 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms