RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 DNAJB3Q8WWF6 145 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 SEMA4AQ9H3S1 761 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 TSHZ2Q9NRE2 1034 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 MAP3K20Q9NYL2 800 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 DDX19BQ9UMR2 479 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 SQORQ9Y6N5 450 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 DOCK8Q8NF50 2099 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 WDR81Q562E7 1941 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 CACNA1IQ9P0X4 2223 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 FGAP02671 866 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 STAG3L1P0CL83 205 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 SCG2P13521 617 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 MRPS6P82932 125 aaKnown RBP8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 APOBRQ0VD83 1088 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 LLGL2Q6P1M3 1020 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 CYFIP1Q7L576 1253 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 COLGALT1Q8NBJ5 622 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 FLCNQ8NFG4 579 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 FEZF2Q8TBJ5 459 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 MICAL1Q8TDZ2 1067 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 MTMR8Q96EF0 704 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 INPP4AQ96PE3 977 aaPredicted RBP8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 FTHL17Q9BXU8 183 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 ADAM7Q9H2U9 754 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 TMX1Q9H3N1 280 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 CWH43Q9H720 699 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 TOMM22Q9NS69 142 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 ZNF215Q9UL58 517 aaPredicted RBP8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 LZTS1Q9Y250 596 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 R4GN57 208 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 ZMYM6O95789 1325 aa8.98□□□□□ -0.97
HERPUD1-206ENST00000563343 SPATA31C2B4DYI2 1134 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 NOP56O00567 594 aaKnown RBP8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 SRGAP2BP0DMP2 458 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 CCND2P30279 289 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 HOXA13P31271 388 aaPredicted RBP8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 PLCB3Q01970 1234 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 UTP14CQ5TAP6 766 aaKnown RBP8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 PLPP4Q5VZY2 271 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 DGKHQ86XP1 1220 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 TBC1D10CQ8IV04 446 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 DCLK2Q8N568 766 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 SAMD3Q8N6K7 520 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 PNMA1Q8ND90 353 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 ZBTB10Q96DT7 871 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 GPATCH3Q96I76 525 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 NECTIN4Q96NY8 510 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 ZKSCAN3Q9BRR0 538 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 MFSD1Q9H3U5 465 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 ERVK-5Q9HDB9 667 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 TMEM260Q9NX78 707 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 LIMD1Q9UGP4 676 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 TUBE1Q9UJT0 475 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 PADI3Q9ULW8 664 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 PCDHB12Q9Y5F1 795 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 HCFC2Q9Y5Z7 792 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 TTC41PQ6P2S7 1318 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 IGSF9BQ9UPX0 1349 aa8.97□□□□□ -0.97
HERPUD1-206ENST00000563343 MGEA5O60502 916 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 WEE2P0C1S8 567 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 SARSP49591 514 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 ITIH3Q06033 890 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 PPFIA1Q13136 1202 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 NEDD9Q14511 834 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 GRIK4Q16099 956 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 RSPO4Q2I0M5 234 aaPredicted RBP8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 SLC35G1Q2M3R5 365 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 ASPRV1Q53RT3 343 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 FAM102BQ5T8I3 360 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 KIAA1841Q6NSI8 718 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 RSPH3Q86UC2 560 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 TDRD5Q8NAT2 981 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 CYP2W1Q8TAV3 490 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 MRPS27Q92552 414 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 CASP10Q92851 521 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 TCF25Q9BQ70 676 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 RTP3Q9BQQ7 232 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 AMNQ9BXJ7 453 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 DCTPP1Q9H773 170 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 VAT1LQ9HCJ6 419 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 AAASQ9NRG9 546 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 TYW1Q9NV66 732 aaKnown RBP8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 USTQ9Y2C2 406 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 TRPV2Q9Y5S1 764 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 NEDD4P46934 1319 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 KDM3AQ9Y4C1 1321 aa8.96□□□□□ -0.98
HERPUD1-206ENST00000563343 MYH15Q9Y2K3 1946 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 GSTTP1A0A1W2PQM5 241 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 FIBPO43427 364 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 PCP11498 1178 aaKnown RBP8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 TCF7P36402 384 aaPredicted RBP8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 MTHFRP42898 656 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 HAND2P61296 217 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 CES5AQ6NT32 575 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 KANK3Q6NY19 840 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 THNSL1Q8IYQ7 743 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 STAG2Q8N3U4 1231 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 KCNG4Q8TDN1 519 aa8.95□□□□□ -0.98
HERPUD1-206ENST00000563343 OTUD7AQ8TE49 926 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms