RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 SPIRE1Q08AE8 756 aa21.08■□□□□ 0.97
CDH11-206ENST00000562998 DEFB128Q7Z7B8 93 aa21.08■□□□□ 0.97
CDH11-206ENST00000562998 BBXQ8WY36 941 aaPredicted RBP21.08■□□□□ 0.97
CDH11-206ENST00000562998 CXXC1Q9P0U4 656 aaPredicted RBP21.08■□□□□ 0.97
CDH11-206ENST00000562998 GABBR1Q9UBS5 961 aa21.08■□□□□ 0.97
CDH11-206ENST00000562998 TRPC6Q9Y210 931 aa21.08■□□□□ 0.97
CDH11-206ENST00000562998 COL1A2P08123 1366 aa21.08■□□□□ 0.96
CDH11-206ENST00000562998 KIF28PB7ZC32 967 aa21.07■□□□□ 0.96
CDH11-206ENST00000562998 THPOP40225 353 aa21.07■□□□□ 0.96
CDH11-206ENST00000562998 SMAD3P84022 425 aaKnown RBP21.07■□□□□ 0.96
CDH11-206ENST00000562998 UGCGQ16739 394 aa21.07■□□□□ 0.96
CDH11-206ENST00000562998 TRAPPC12Q8WVT3 735 aa21.07■□□□□ 0.96
CDH11-206ENST00000562998 MTMR9Q96QG7 549 aa21.07■□□□□ 0.96
CDH11-206ENST00000562998 SAMM50Q9Y512 469 aa21.07■□□□□ 0.96
CDH11-206ENST00000562998 RSPH10B2B2RC85 870 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 EML1O00423 815 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 CHMP2AO43633 222 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 STBD1O95210 358 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 RSPH10BP0C881 870 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 GJB2P29033 226 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 ZNF484Q5JVG2 852 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 OTOP2Q7RTS6 562 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 MIER3Q7Z3K6 550 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 NOSTRINQ8IVI9 506 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 ZBTB10Q96DT7 871 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 OSBPL7Q9BZF2 842 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 KIF3AQ9Y496 699 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 PCDHA2Q9Y5H9 948 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 SIP14410 1827 aa21.06■□□□□ 0.96
CDH11-206ENST00000562998 IGBP1P78318 339 aa21.05■□□□□ 0.96
CDH11-206ENST00000562998 MGAT3Q09327 533 aa21.05■□□□□ 0.96
CDH11-206ENST00000562998 MKRN4PQ13434 485 aaPredicted RBP21.05■□□□□ 0.96
CDH11-206ENST00000562998 TCTN1Q2MV58 587 aa21.05■□□□□ 0.96
CDH11-206ENST00000562998 FAM109BQ6ICB4 259 aaPredicted RBP21.05■□□□□ 0.96
CDH11-206ENST00000562998 MTHFD1LQ6UB35 978 aa21.05■□□□□ 0.96
CDH11-206ENST00000562998 SLFN12Q8IYM2 578 aa21.05■□□□□ 0.96
CDH11-206ENST00000562998 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.05■□□□□ 0.96
CDH11-206ENST00000562998 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.04■□□□□ 0.96
CDH11-206ENST00000562998 SMIM35A0A1B0GVV1 85 aa21.04■□□□□ 0.96
CDH11-206ENST00000562998 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.04■□□□□ 0.96
CDH11-206ENST00000562998 CHRNA1P02708 482 aa21.04■□□□□ 0.96
CDH11-206ENST00000562998 RPLP2P05387 115 aaKnown RBP21.04■□□□□ 0.96
CDH11-206ENST00000562998 KLRC1P26715 233 aa21.04■□□□□ 0.96
CDH11-206ENST00000562998 TRAPPC10P48553 1259 aa21.04■□□□□ 0.96
CDH11-206ENST00000562998 DNAJB3Q8WWF6 145 aa21.04■□□□□ 0.96
CDH11-206ENST00000562998 FAM167AQ96KS9 214 aa21.04■□□□□ 0.96
CDH11-206ENST00000562998 RBAK-RBAKDNI3L0D1 243 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 NEMFO60524 1076 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 BAIAP3O94812 1187 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 C22orf31O95567 290 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 OATP04181 439 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 PRKCEQ02156 737 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 ORC2Q13416 577 aaPredicted RBP21.03■□□□□ 0.96
CDH11-206ENST00000562998 TARBP2Q15633 366 aaKnown RBP21.03■□□□□ 0.96
CDH11-206ENST00000562998 PLEKHG4Q58EX7 1191 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 CNKSR3Q6P9H4 555 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 CEP89Q96ST8 783 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 MTIF3Q9H2K0 278 aaKnown RBP21.03■□□□□ 0.96
CDH11-206ENST00000562998 TMEM60Q9H2L4 133 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 SMC3Q9UQE7 1217 aa21.03■□□□□ 0.96
CDH11-206ENST00000562998 BAG4O95429 457 aaKnown RBP21.02■□□□□ 0.96
CDH11-206ENST00000562998 ACTN1P12814 892 aa21.02■□□□□ 0.96
CDH11-206ENST00000562998 TOB1P50616 345 aaPredicted RBP21.02■□□□□ 0.96
CDH11-206ENST00000562998 CALCRLQ16602 461 aa21.02■□□□□ 0.96
CDH11-206ENST00000562998 CKAP2LQ8IYA6 745 aa21.02■□□□□ 0.96
CDH11-206ENST00000562998 LINC01465Q8N7H1 131 aa21.02■□□□□ 0.96
CDH11-206ENST00000562998 NIFKQ9BYG3 293 aaKnown RBP21.02■□□□□ 0.96
CDH11-206ENST00000562998 FTOQ9C0B1 505 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDH11-206ENST00000562998 CTSHP09668 335 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 PSMC5P62195 406 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 EPHA7Q15375 998 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 RSPH3Q86UC2 560 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 KIAA0319LQ8IZA0 1049 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 NME8Q8N427 588 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 SNX21Q969T3 373 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 NRBP2Q9NSY0 501 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 WRAP73Q9P2S5 460 aaPredicted RBP21.01■□□□□ 0.95
CDH11-206ENST00000562998 PCDHA12Q9UN75 941 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 CEP131Q9UPN4 1083 aa21.01■□□□□ 0.95
CDH11-206ENST00000562998 PTPRSQ13332 1948 aa21■□□□□ 0.95
CDH11-206ENST00000562998 GRXCR1A8MXD5 290 aa21■□□□□ 0.95
CDH11-206ENST00000562998 MCM7P33993 719 aa21■□□□□ 0.95
CDH11-206ENST00000562998 MRPS6P82932 125 aaKnown RBP21■□□□□ 0.95
CDH11-206ENST00000562998 XKR3Q5GH77 459 aa21■□□□□ 0.95
CDH11-206ENST00000562998 TTC38Q5R3I4 469 aa21■□□□□ 0.95
CDH11-206ENST00000562998 C4orf32Q8N8J7 132 aa21■□□□□ 0.95
CDH11-206ENST00000562998 BANK1Q8NDB2 785 aa21■□□□□ 0.95
CDH11-206ENST00000562998 DBF4BQ8NFT6 615 aa21■□□□□ 0.95
CDH11-206ENST00000562998 INTS4Q96HW7 963 aaKnown RBP21■□□□□ 0.95
CDH11-206ENST00000562998 TTC12Q9H892 705 aaPredicted RBP21■□□□□ 0.95
CDH11-206ENST00000562998 SLC4A7Q9Y6M7 1214 aa21■□□□□ 0.95
CDH11-206ENST00000562998 CHD9Q3L8U1 2897 aa21■□□□□ 0.95
CDH11-206ENST00000562998 EVPLQ92817 2033 aa21■□□□□ 0.95
CDH11-206ENST00000562998 KDM3AQ9Y4C1 1321 aa21■□□□□ 0.95
CDH11-206ENST00000562998 ABHD14A-ACY1A0A1B0GW23 586 aa20.99■□□□□ 0.95
CDH11-206ENST00000562998 SLC34A2O95436 690 aa20.99■□□□□ 0.95
CDH11-206ENST00000562998 P4HBP07237 508 aaKnown RBP20.99■□□□□ 0.95
CDH11-206ENST00000562998 QARSP47897 775 aaKnown RBP20.99■□□□□ 0.95
CDH11-206ENST00000562998 ANO5Q75V66 913 aa20.99■□□□□ 0.95
CDH11-206ENST00000562998 PHOSPHO2Q8TCD6 241 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms