RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 MICAL3Q7RTP6 2002 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 ADCY6O43306 1168 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 MMP20O60882 483 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 CSF1RP07333 972 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 NPR3P17342 541 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 NDUFV1P49821 464 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 NRLP54845 237 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 GJA9P57773 515 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 ADAM15Q13444 863 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 UBE4AQ14139 1066 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 PDZD3Q86UT5 571 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 FLCNQ8NFG4 579 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 CALR3Q96L12 384 aaKnown RBP7.4□□□□□ -1.22
TCF4-213ENST00000562543 RTP3Q9BQQ7 232 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 SEZ6LQ9BYH1 1024 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 SMOC2Q9H3U7 446 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 VRTNQ9H8Y1 702 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 PARD6AQ9NPB6 346 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 DDX4Q9NQI0 724 aaKnown RBP7.4□□□□□ -1.22
TCF4-213ENST00000562543 USP18Q9UMW8 372 aa7.4□□□□□ -1.22
TCF4-213ENST00000562543 SPTAN1Q13813 2472 aaKnown RBP7.4□□□□□ -1.23
TCF4-213ENST00000562543 RELNP78509 3460 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 CFAP46Q8IYW2 2715 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 MYH2Q9UKX2 1941 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 CLSPNQ9HAW4 1339 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 F8W735 103 aaPredicted RBP7.39□□□□□ -1.23
TCF4-213ENST00000562543 KINO60870 393 aaKnown RBP7.39□□□□□ -1.23
TCF4-213ENST00000562543 SP9P0CG40 484 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 ERCC3P19447 782 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 NKX3-2P78367 333 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 ITGA7Q13683 1181 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 SETDB1Q15047 1291 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 KRT24Q2M2I5 525 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 FBXO33Q7Z6M2 555 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 TREML1Q86YW5 311 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 RIN2Q8WYP3 895 aaPredicted RBP7.39□□□□□ -1.23
TCF4-213ENST00000562543 SUSD6Q92537 303 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 C12orf42Q96LP6 360 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
TCF4-213ENST00000562543 FTOQ9C0B1 505 aaKnown RBP eCLIP7.39□□□□□ -1.23
TCF4-213ENST00000562543 BABAM1Q9NWV8 329 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 FAM184BQ9ULE4 1060 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 TRIM33Q9UPN9 1127 aa7.39□□□□□ -1.23
TCF4-213ENST00000562543 MROH5Q6ZUA9 1318 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 ANKRD18BA2A2Z9 1011 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 ARHGAP6O43182 974 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 CABYRO75952 493 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 MED26O95402 600 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 IGKV5-2P06315 115 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 IQCF3P0C7M6 154 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 CYP2C9P11712 490 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 PLA2G2AP14555 144 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 CATSPERGQ6ZRH7 1159 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 GLIS3Q8NEA6 775 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 DDX1Q92499 740 aaKnown RBP7.38□□□□□ -1.23
TCF4-213ENST00000562543 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 SIL1Q9H173 461 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 ALDH8A1Q9H2A2 487 aaPredicted RBP7.38□□□□□ -1.23
TCF4-213ENST00000562543 SPC25Q9HBM1 224 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 KCNMB2Q9Y691 235 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 ITPR3Q14573 2671 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 CELSR3Q9NYQ7 3312 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 NBPF19A0A087WUL8 3843 aa7.38□□□□□ -1.23
TCF4-213ENST00000562543 EIF4E1BA6NMX2 242 aaKnown RBP7.37□□□□□ -1.23
TCF4-213ENST00000562543 PLIN1O60240 522 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 SRSF1Q07955 248 aaKnown RBP eCLIP7.37□□□□□ -1.23
TCF4-213ENST00000562543 COX20Q5RI15 118 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 MCTP1Q6DN14 999 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 CXCL17Q6UXB2 119 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 TMEM130Q8N3G9 435 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 ZCCHC14Q8WYQ9 949 aaKnown RBP7.37□□□□□ -1.23
TCF4-213ENST00000562543 GATA6Q92908 595 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 SECISBP2LQ93073 1101 aaKnown RBP7.37□□□□□ -1.23
TCF4-213ENST00000562543 MYO19Q96H55 970 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 SPATC1LQ9H0A9 340 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
TCF4-213ENST00000562543 LMAN2LQ9H0V9 348 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 CNPY2Q9Y2B0 182 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 DIS3Q9Y2L1 958 aaKnown RBP7.37□□□□□ -1.23
TCF4-213ENST00000562543 INSL6Q9Y581 213 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 CACNA1IQ9P0X4 2223 aa7.37□□□□□ -1.23
TCF4-213ENST00000562543 GLP2RO95838 553 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 GHRHP01286 108 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 PSAPP07602 524 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 ASNSP08243 561 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 HOXB7P09629 217 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 GLB1P16278 677 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 JAG1P78504 1218 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 HTRA4P83105 476 aaPredicted RBP7.36□□□□□ -1.23
TCF4-213ENST00000562543 ZNF792Q3KQV3 632 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 FAM26DQ5JW98 314 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 FAM117BQ6P1L5 589 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 TXNDC11Q6PKC3 985 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 UBE3BQ7Z3V4 1068 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 VPS37DQ86XT2 251 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 TMEM192Q8IY95 271 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 GALNT11Q8NCW6 608 aa7.36□□□□□ -1.23
TCF4-213ENST00000562543 UBL7Q96S82 380 aaPredicted RBP7.36□□□□□ -1.23
TCF4-213ENST00000562543 LSM14BQ9BX40 385 aaKnown RBP7.36□□□□□ -1.23
TCF4-213ENST00000562543 MROH8Q9H579 483 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms