RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 NKAPQ8N5F7 415 aaKnown RBP6.12□□□□□ -1.43
CAPN3-211ENST00000562199 GBP7Q8N8V2 638 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-211ENST00000562199 USP38Q8NB14 1042 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 ATP11CQ8NB49 1132 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 ANKRD24Q8TF21 1146 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 TIFAQ96CG3 184 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 THOC1Q96FV9 657 aaKnown RBP6.12□□□□□ -1.43
CAPN3-211ENST00000562199 PPM1MQ96MI6 270 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 TTPALQ9BTX7 342 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 VCX3BQ9H321 246 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 ZNF408Q9H9D4 720 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 INCENPQ9NQS7 918 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 OBP2AQ9NY56 170 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 NKIRAS2Q9NYR9 191 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 CEP72Q9P209 647 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 STK39Q9UEW8 545 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 NAGPAQ9UK23 515 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 MTUS1Q9ULD2 1270 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 DUSP12Q9UNI6 340 aa6.12□□□□□ -1.43
CAPN3-211ENST00000562199 PPLO60437 1756 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ANKRD26Q9UPS8 1709 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ADGRB1O14514 1584 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ABCC11Q96J66 1382 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ITIH6Q6UXX5 1313 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 FAM196BA6NMK8 535 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 BTBD11A6QL63 1104 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 C9orf172C9J069 976 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 POLR3GO15318 223 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 PGRP06401 933 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 LDHBP07195 334 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 PCP11498 1178 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 RLBP1P12271 317 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ATP6V1B1P15313 513 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 SELPP16109 830 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 GARTP22102 1010 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 IGFBP4P22692 258 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 TARSP26639 723 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 GRNP28799 593 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 RDXP35241 583 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 CCT5P48643 541 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 IDH3AP50213 366 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 AFF1P51825 1210 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 PIP4K2BP78356 416 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 MLLT1Q03111 559 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ITIH3Q06033 890 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 FMR1Q06787 632 aaKnown RBP eCLIP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 CACNB2Q08289 660 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ADCY1Q08828 1119 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 PIN1Q13526 163 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 IQCB1Q15051 598 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 SETMARQ53H47 684 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 HECTD3Q5T447 861 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 TATDN1Q6P1N9 297 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 IGF2-ASQ6U949 168 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 DSTYKQ6XUX3 929 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 INTS8Q75QN2 995 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ZNF771Q7L3S4 317 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 CCDC186Q7Z3E2 898 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 LRP10Q7Z4F1 713 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 RALYLQ86SE5 291 aaKnown RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 FAM35AQ86V20 835 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 SPATA2LQ8IUW3 424 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-211ENST00000562199 FAM26EQ8N5C1 309 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 SGCDQ92629 289 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 DPF3Q92784 378 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 CCDC114Q96M63 670 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 C7orf25Q9BPX7 421 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 HERC2P3Q9BVR0 1158 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 PANK2Q9BZ23 570 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 RASSF4Q9H2L5 321 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 GRPEL1Q9HAV7 217 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 TBC1D22BQ9NU19 505 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ZFATQ9P243 1243 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 AGTPBP1Q9UPW5 1226 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 USP20Q9Y2K6 914 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 ANGPTL3Q9Y5C1 460 aa6.11□□□□□ -1.43
CAPN3-211ENST00000562199 UGGT1Q9NYU2 1555 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 MED14O60244 1454 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 COL3A1P02461 1466 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-211ENST00000562199 USP31Q70CQ4 1352 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 IBTKQ9P2D0 1353 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-211ENST00000562199 SPAG9O60271 1321 aaKnown RBP6.1□□□□□ -1.43
CAPN3-211ENST00000562199 SCO2A0A1W2PP80 73 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 DYRK3O43781 588 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 ZBED4O75132 1171 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 TIPRLO75663 272 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 SASH3O75995 380 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 RPS6KB1P23443 525 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 MAP2K2P36507 400 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 POLD2P49005 469 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 HDAC4P56524 1084 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 SEMA3AQ14563 771 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 RBBP5Q15291 538 aaKnown RBP6.1□□□□□ -1.43
CAPN3-211ENST00000562199 INAQ16352 499 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 MUM1L1Q5H9M0 696 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 SH2D4BQ5SQS7 431 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 IER5Q5VY09 327 aa6.1□□□□□ -1.43
CAPN3-211ENST00000562199 KAZNQ674X7 775 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms