RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 OATP04181 439 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 GNAT1P11488 350 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 INSRRP14616 1297 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 ATP2B1P20020 1258 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 MUTP22033 750 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 MARK3P27448 753 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 TXKP42681 527 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 QARSP47897 775 aaKnown RBP15.09■□□□□ 0.01
CDH1-204ENST00000562118 PSMC5P62195 406 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 PRKCEQ02156 737 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 PPFIA1Q13136 1202 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 GRIK4Q16099 956 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 PTGISQ16647 500 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 ZNF484Q5JVG2 852 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 PPP1R13LQ8WUF5 828 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 TNPO1Q92973 898 aaKnown RBP15.09■□□□□ 0.01
CDH1-204ENST00000562118 WNT8BQ93098 351 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 VWCEQ96DN2 955 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 GDF15Q99988 308 aa15.09■□□□□ 0.01
CDH1-204ENST00000562118 POLR3CQ9BUI4 534 aaPredicted RBP15.09■□□□□ 0.01
CDH1-204ENST00000562118 POTEMA6NI47 508 aa15.08■□□□□ 0
CDH1-204ENST00000562118 BACH1O14867 736 aa15.08■□□□□ 0
CDH1-204ENST00000562118 TREHO43280 583 aa15.08■□□□□ 0
CDH1-204ENST00000562118 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0
CDH1-204ENST00000562118 SPATA31C1P0DKV0 1188 aa15.08■□□□□ 0
CDH1-204ENST00000562118 BMP8BP34820 402 aa15.08■□□□□ 0
CDH1-204ENST00000562118 NASPP49321 788 aaPredicted RBP15.08■□□□□ 0
CDH1-204ENST00000562118 ZNF200P98182 395 aaPredicted RBP15.08■□□□□ 0
CDH1-204ENST00000562118 EIF2AK1Q9BQI3 630 aaKnown RBP15.08■□□□□ 0
CDH1-204ENST00000562118 WNT8AQ9H1J5 351 aa15.08■□□□□ 0
CDH1-204ENST00000562118 TMEM39AQ9NV64 488 aa15.08■□□□□ 0
CDH1-204ENST00000562118 SETD4Q9NVD3 440 aa15.08■□□□□ 0
CDH1-204ENST00000562118 SAMM50Q9Y512 469 aa15.08■□□□□ 0
CDH1-204ENST00000562118 PPME1Q9Y570 386 aa15.08■□□□□ 0
CDH1-204ENST00000562118 TCHHQ07283 1943 aa15.07■□□□□ 0
CDH1-204ENST00000562118 IGKV6-21A0A0C4DH24 114 aa15.07■□□□□ 0
CDH1-204ENST00000562118 C22orf31O95567 290 aa15.07■□□□□ 0
CDH1-204ENST00000562118 RPLP2P05387 115 aaKnown RBP15.07■□□□□ 0
CDH1-204ENST00000562118 CYP2C9P11712 490 aa15.07■□□□□ 0
CDH1-204ENST00000562118 RPA1P27694 616 aa15.07■□□□□ 0
CDH1-204ENST00000562118 SF3A1Q15459 793 aaKnown RBP15.07■□□□□ 0
CDH1-204ENST00000562118 XKR3Q5GH77 459 aa15.07■□□□□ 0
CDH1-204ENST00000562118 FAM47CQ5HY64 1035 aa15.07■□□□□ 0
CDH1-204ENST00000562118 FAM26DQ5JW98 314 aa15.07■□□□□ 0
CDH1-204ENST00000562118 HYIQ5T013 277 aa15.07■□□□□ 0
CDH1-204ENST00000562118 PRPF38BQ5VTL8 546 aaKnown RBP15.07■□□□□ 0
CDH1-204ENST00000562118 MFSD5Q6N075 450 aa15.07■□□□□ 0
CDH1-204ENST00000562118 TAF2Q6P1X5 1199 aa15.07■□□□□ 0
CDH1-204ENST00000562118 ANO5Q75V66 913 aa15.07■□□□□ 0
CDH1-204ENST00000562118 LXNQ9BS40 222 aa15.07■□□□□ 0
CDH1-204ENST00000562118 MMTAG2Q9BU76 263 aaKnown RBP15.07■□□□□ 0
CDH1-204ENST00000562118 HIPK3Q9H422 1215 aa15.07■□□□□ 0
CDH1-204ENST00000562118 ZSWIM4Q9H7M6 989 aa15.07■□□□□ 0
CDH1-204ENST00000562118 TUFT1Q9NNX1 390 aa15.07■□□□□ 0
CDH1-204ENST00000562118 TUBE1Q9UJT0 475 aa15.07■□□□□ 0
CDH1-204ENST00000562118 CEP131Q9UPN4 1083 aa15.07■□□□□ 0
CDH1-204ENST00000562118 PCDHA2Q9Y5H9 948 aa15.07■□□□□ 0
CDH1-204ENST00000562118 UMODL1Q5DID0 1318 aa15.07■□□□□ 0
CDH1-204ENST00000562118 TET1Q8NFU7 2136 aa15.07■□□□□ 0
CDH1-204ENST00000562118 SMIM35A0A1B0GVV1 85 aa15.06■□□□□ 0
CDH1-204ENST00000562118 SLC26A4O43511 780 aa15.06■□□□□ 0
CDH1-204ENST00000562118 DKC1O60832 514 aaKnown RBP eCLIP15.06■□□□□ 0
CDH1-204ENST00000562118 TECP42680 631 aa15.06■□□□□ 0
CDH1-204ENST00000562118 MGAT3Q09327 533 aa15.06■□□□□ 0
CDH1-204ENST00000562118 GPNMBQ14956 572 aa15.06■□□□□ 0
CDH1-204ENST00000562118 ATL3Q6DD88 541 aa15.06■□□□□ 0
CDH1-204ENST00000562118 NCAPH2Q6IBW4 605 aa15.06■□□□□ 0
CDH1-204ENST00000562118 FAM173BQ6P4H8 233 aa15.06■□□□□ 0
CDH1-204ENST00000562118 MTHFD1LQ6UB35 978 aa15.06■□□□□ 0
CDH1-204ENST00000562118 BANK1Q8NDB2 785 aa15.06■□□□□ 0
CDH1-204ENST00000562118 DYDC2Q96IM9 177 aa15.06■□□□□ 0
CDH1-204ENST00000562118 USP28Q96RU2 1077 aa15.06■□□□□ 0
CDH1-204ENST00000562118 FTOQ9C0B1 505 aaKnown RBP eCLIP15.06■□□□□ 0
CDH1-204ENST00000562118 RGL1Q9NZL6 768 aa15.06■□□□□ 0
CDH1-204ENST00000562118 ZMYND8Q9ULU4 1186 aaPredicted RBP15.06■□□□□ 0
CDH1-204ENST00000562118 TRPC6Q9Y210 931 aa15.06■□□□□ 0
CDH1-204ENST00000562118 CLIC4Q9Y696 253 aa15.06■□□□□ 0
CDH1-204ENST00000562118 STK24Q9Y6E0 443 aa15.06■□□□□ 0
CDH1-204ENST00000562118 MED24O75448 989 aa15.05■□□□□ -0
CDH1-204ENST00000562118 CKBP12277 381 aa15.05■□□□□ -0
CDH1-204ENST00000562118 XRCC6P12956 609 aaKnown RBP eCLIP15.05■□□□□ -0
CDH1-204ENST00000562118 RFC2P35250 354 aa15.05■□□□□ -0
CDH1-204ENST00000562118 MAGEA10P43363 369 aaPredicted RBP15.05■□□□□ -0
CDH1-204ENST00000562118 BFSP2Q13515 415 aa15.05■□□□□ -0
CDH1-204ENST00000562118 SLC39A14Q15043 492 aa15.05■□□□□ -0
CDH1-204ENST00000562118 TMEM266Q2M3C6 531 aa15.05■□□□□ -0
CDH1-204ENST00000562118 DTHD1Q6ZMT9 781 aa15.05■□□□□ -0
CDH1-204ENST00000562118 RUFY4Q6ZNE9 571 aa15.05■□□□□ -0
CDH1-204ENST00000562118 CATSPER3Q86XQ3 398 aa15.05■□□□□ -0
CDH1-204ENST00000562118 KCTD17Q8N5Z5 321 aa15.05■□□□□ -0
CDH1-204ENST00000562118 CCDC155Q8N6L0 562 aa15.05■□□□□ -0
CDH1-204ENST00000562118 AK8Q96MA6 479 aa15.05■□□□□ -0
CDH1-204ENST00000562118 NRBP2Q9NSY0 501 aa15.05■□□□□ -0
CDH1-204ENST00000562118 FBXO2Q9UK22 296 aaPredicted RBP15.05■□□□□ -0
CDH1-204ENST00000562118 KDM3AQ9Y4C1 1321 aa15.05■□□□□ -0
CDH1-204ENST00000562118 MARCH6O60337 910 aa15.04■□□□□ -0
CDH1-204ENST00000562118 PARNO95453 639 aaKnown RBP15.04■□□□□ -0
CDH1-204ENST00000562118 YEATS4O95619 227 aa15.04■□□□□ -0
CDH1-204ENST00000562118 CXCL10P02778 98 aa15.04■□□□□ -0
CDH1-204ENST00000562118 IQCF3P0C7M6 154 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms