RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CHMP6Q96FZ7 201 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 HNRNPDLO14979 420 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 SEMA3EO15041 775 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 MYL1P05976 194 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 IFRD2Q12894 506 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 AOC3Q16853 763 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 HP1BP3Q5SSJ5 553 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 DEPDC1BQ8WUY9 529 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TRIM55Q9BYV6 548 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 MAP10Q9P2G4 905 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 STOML1Q9UBI4 398 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 STK17AQ9UEE5 414 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 PRPF3O43395 683 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 GRAMD4Q6IC98 578 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 LRRC1Q9BTT6 524 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 CALN1Q9BXU9 219 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 SYNDIG1Q9H7V2 258 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 KRT82Q9NSB4 513 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 CCDC195A0A1B0GUA6 201 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 MEFVO15553 781 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 SCNN1DP51172 638 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TNFAIP1Q13829 316 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 ZNF473Q8WTR7 871 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 NCAPGQ9BPX3 1015 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 EFHD1Q9BUP0 239 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 RPS8P62241 208 aaKnown RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TMPRSS15P98073 1019 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 UBE2SQ16763 222 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 C16orf87Q6PH81 154 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 SEPT12Q8IYM1 358 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 RAET1EQ8TD07 263 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 HEMGNQ9BXL5 484 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 FBXL5Q9UKA1 691 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TTC26A0AVF1 554 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 GOLGA8MH3BSY2 632 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 PCCAP05165 728 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 PLA2G4BP0C869 781 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 OXER1Q8TDS5 423 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TRIM11Q96F44 468 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TTC1Q99614 292 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 SUGCTQ9HAC7 445 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 CIAO1O76071 339 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 DDIT3P35638 169 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 RWDD2BP57060 319 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 BPIFB4P59827 614 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 RSPH3Q86UC2 560 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 MAP7D3Q8IWC1 876 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 KCTD6Q8NC69 237 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 NUDCD1Q96RS6 583 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 SH3GL3Q99963 347 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 AP5M1Q9H0R1 490 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 RPAP1Q9BWH6 1393 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 ERVK-7P63135 1459 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 PHKG2P15735 406 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 PTPREP23469 700 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 ATICP31939 592 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 KIAA1841Q6NSI8 718 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 CENPUQ71F23 418 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 PCGF5Q86SE9 256 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 FAM161BQ96MY7 647 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 PPME1Q9Y570 386 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 DYNC1I2Q13409 638 aaKnown RBP10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 ATG16L1Q676U5 607 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 GPR108Q9NPR9 543 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 PTCH1Q13635 1447 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 IQANK1A0A1B0GTG1 560 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 SPOPLQ6IQ16 392 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 TAF1DQ9H5J8 278 aaPredicted RBP10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 CDR2Q01850 454 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 SLFN13Q68D06 897 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 SESTD1Q86VW0 696 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 CRLF3Q8IUI8 442 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 CCNYQ8ND76 341 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 SERPINI1Q99574 410 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 FGFR1OP2Q9NVK5 253 aa10.97□□□□□ -0.65
GTF3C1-202ENST00000561623 HAUS5O94927 633 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 KRT10P13645 584 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 EPHB1P54762 984 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 DNAJC24Q6P3W2 148 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 HACE1Q8IYU2 909 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 ZMAT2Q96NC0 199 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 PRMT1Q99873 361 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 HESX1Q9UBX0 185 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 ZNF711Q9Y462 761 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 PODXLO00592 558 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 DIAPH2O60879 1101 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 GAP43P17677 238 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 LRRC63Q05C16 580 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 EPN3Q9H201 632 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 INPP5FQ9Y2H2 1132 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 KDM6BO15054 1643 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 GOLGA8IPA6NC78 632 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 GOLGA8JA6NMD2 632 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 SFI1A8K8P3 1242 aa10.96□□□□□ -0.65
GTF3C1-202ENST00000561623 ATP5HO75947 161 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms